Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cd74P04441 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cd74P04441 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.86■□□□□ 0.45
Cd74P04441 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cd74P04441 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cd74P04441 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cd74P04441 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd74P04441 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd74P04441 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd74P04441 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd74P04441 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Cd74P04441 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cd74P04441 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cd74P04441 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd74P04441 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.84■□□□□ 0.45
Cd74P04441 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd74P04441 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd74P04441 Gm5812-201ENSMUST00000061073 957 ntBASIC17.84■□□□□ 0.45
Cd74P04441 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd74P04441 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.83■□□□□ 0.45
Cd74P04441 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd74P04441 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd74P04441 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd74P04441 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.83■□□□□ 0.44
Cd74P04441 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.83■□□□□ 0.44
Cd74P04441 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd74P04441 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd74P04441 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd74P04441 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd74P04441 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cd74P04441 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd74P04441 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd74P04441 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cd74P04441 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd74P04441 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd74P04441 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd74P04441 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd74P04441 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Cd74P04441 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd74P04441 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.79■□□□□ 0.44
Cd74P04441 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cd74P04441 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.79■□□□□ 0.44
Cd74P04441 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.79■□□□□ 0.44
Cd74P04441 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cd74P04441 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd74P04441 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.78■□□□□ 0.44
Cd74P04441 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.78■□□□□ 0.44
Cd74P04441 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd74P04441 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd74P04441 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd74P04441 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.77■□□□□ 0.44
Cd74P04441 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cd74P04441 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cd74P04441 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd74P04441 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd74P04441 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cd74P04441 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd74P04441 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd74P04441 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cd74P04441 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd74P04441 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd74P04441 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cd74P04441 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd74P04441 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cd74P04441 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cd74P04441 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
Cd74P04441 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd74P04441 Gm15546-201ENSMUST00000122095 826 ntBASIC17.75■□□□□ 0.43
Cd74P04441 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cd74P04441 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.75■□□□□ 0.43
Cd74P04441 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd74P04441 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd74P04441 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms