Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 AC010501.1-201ENST00000606270 1962 ntBASIC21.01■□□□□ 0.95
CNOT4O95628 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CNOT4O95628 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT4O95628 AC092803.2-201ENST00000564287 1899 ntBASIC21.01■□□□□ 0.95
CNOT4O95628 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CNOT4O95628 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21■□□□□ 0.95
CNOT4O95628 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT4O95628 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNOT4O95628 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT4O95628 PVT1_1.1-201ENST00000615125 194 ntBASIC21■□□□□ 0.95
CNOT4O95628 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT4O95628 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT4O95628 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNOT4O95628 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT4O95628 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.99■□□□□ 0.95
CNOT4O95628 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT4O95628 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.99■□□□□ 0.95
CNOT4O95628 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.99■□□□□ 0.95
CNOT4O95628 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT4O95628 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT4O95628 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT4O95628 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT4O95628 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
CNOT4O95628 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT4O95628 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT4O95628 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT4O95628 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT4O95628 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT4O95628 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CNOT4O95628 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT4O95628 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT4O95628 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.97■□□□□ 0.95
CNOT4O95628 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT4O95628 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNOT4O95628 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 KRT8P33-201ENST00000508125 1423 ntBASIC20.96■□□□□ 0.95
CNOT4O95628 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 AL592295.1-201ENST00000400984 884 ntBASIC20.96■□□□□ 0.95
CNOT4O95628 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 AC103834.1-201ENST00000520383 144 ntBASIC20.96■□□□□ 0.95
CNOT4O95628 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNOT4O95628 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNOT4O95628 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT4O95628 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT4O95628 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNOT4O95628 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.95■□□□□ 0.94
CNOT4O95628 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.95■□□□□ 0.94
CNOT4O95628 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT4O95628 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT4O95628 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.94■□□□□ 0.94
CNOT4O95628 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNOT4O95628 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.94■□□□□ 0.94
CNOT4O95628 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNOT4O95628 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.94■□□□□ 0.94
CNOT4O95628 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT4O95628 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT4O95628 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.93■□□□□ 0.94
CNOT4O95628 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT4O95628 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CNOT4O95628 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT4O95628 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNOT4O95628 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNOT4O95628 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 AC097639.1-201ENST00000565519 1891 ntBASIC20.92■□□□□ 0.94
CNOT4O95628 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 AC096887.2-201ENST00000623443 1957 ntBASIC20.92■□□□□ 0.94
CNOT4O95628 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 ERN1-208ENST00000606895 2068 ntBASIC20.92■□□□□ 0.94
CNOT4O95628 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNOT4O95628 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.92■□□□□ 0.94
CNOT4O95628 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNOT4O95628 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CNOT4O95628 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT4O95628 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT4O95628 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNOT4O95628 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CNOT4O95628 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CNOT4O95628 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CNOT4O95628 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.91■□□□□ 0.94
CNOT4O95628 DUSP8P4-201ENST00000399538 1761 ntBASIC20.9■□□□□ 0.94
CNOT4O95628 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT4O95628 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT4O95628 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CNOT4O95628 AC009299.2-201ENST00000482477 511 ntBASIC20.9■□□□□ 0.94
CNOT4O95628 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.9■□□□□ 0.94
CNOT4O95628 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNOT4O95628 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.89■□□□□ 0.94
CNOT4O95628 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNOT4O95628 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CNOT4O95628 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms