Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
TNFSF13O75888 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.02■□□□□ 0.96
TNFSF13O75888 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF13O75888 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TNFSF13O75888 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF13O75888 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF13O75888 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF13O75888 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF13O75888 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF13O75888 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TNFSF13O75888 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF13O75888 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF13O75888 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF13O75888 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF13O75888 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF13O75888 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21■□□□□ 0.95
TNFSF13O75888 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TNFSF13O75888 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF13O75888 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFSF13O75888 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF13O75888 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TNFSF13O75888 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21■□□□□ 0.95
TNFSF13O75888 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21■□□□□ 0.95
TNFSF13O75888 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21■□□□□ 0.95
TNFSF13O75888 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFSF13O75888 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TNFSF13O75888 ERN1-208ENST00000606895 2068 ntBASIC20.99■□□□□ 0.95
TNFSF13O75888 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFSF13O75888 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF13O75888 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF13O75888 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF13O75888 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF13O75888 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF13O75888 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
TNFSF13O75888 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF13O75888 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFSF13O75888 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF13O75888 BX664725.1-201ENST00000438252 379 ntBASIC20.97■□□□□ 0.95
TNFSF13O75888 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF13O75888 AC096887.2-201ENST00000623443 1957 ntBASIC20.97■□□□□ 0.95
TNFSF13O75888 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF13O75888 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFSF13O75888 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFSF13O75888 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 AC137630.3-201ENST00000607245 391 ntBASIC20.96■□□□□ 0.95
TNFSF13O75888 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF13O75888 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFSF13O75888 KRT125P-201ENST00000546827 989 ntBASIC20.95■□□□□ 0.94
TNFSF13O75888 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF13O75888 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFSF13O75888 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.94■□□□□ 0.94
TNFSF13O75888 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TNFSF13O75888 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.94■□□□□ 0.94
TNFSF13O75888 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFSF13O75888 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.94■□□□□ 0.94
TNFSF13O75888 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TNFSF13O75888 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF13O75888 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 AL356441.2-201ENST00000443009 864 ntBASIC20.93■□□□□ 0.94
TNFSF13O75888 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 MIR4281-201ENST00000580852 62 ntBASIC20.93■□□□□ 0.94
TNFSF13O75888 MIR4787-201ENST00000607364 84 ntBASIC20.93■□□□□ 0.94
TNFSF13O75888 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.93■□□□□ 0.94
TNFSF13O75888 AC011551.1-201ENST00000614101 683 ntBASIC20.93■□□□□ 0.94
TNFSF13O75888 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TNFSF13O75888 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF13O75888 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF13O75888 AC010501.1-201ENST00000606270 1962 ntBASIC20.92■□□□□ 0.94
TNFSF13O75888 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF13O75888 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF13O75888 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TNFSF13O75888 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF13O75888 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
TNFSF13O75888 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF13O75888 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF13O75888 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF13O75888 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF13O75888 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF13O75888 FOXO3B-201ENST00000395675 1928 ntBASIC20.91■□□□□ 0.94
TNFSF13O75888 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF13O75888 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TNFSF13O75888 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms