Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tspan6O70401 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.04■□□□□ 0.96
Tspan6O70401 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Tspan6O70401 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Tspan6O70401 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 Gm22238-201ENSMUST00000175222 88 ntBASIC21.03■□□□□ 0.96
Tspan6O70401 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tspan6O70401 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tspan6O70401 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tspan6O70401 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tspan6O70401 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tspan6O70401 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tspan6O70401 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tspan6O70401 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.02■□□□□ 0.96
Tspan6O70401 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tspan6O70401 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tspan6O70401 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tspan6O70401 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.01■□□□□ 0.95
Tspan6O70401 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.01■□□□□ 0.95
Tspan6O70401 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.01■□□□□ 0.95
Tspan6O70401 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tspan6O70401 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tspan6O70401 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tspan6O70401 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21■□□□□ 0.95
Tspan6O70401 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tspan6O70401 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tspan6O70401 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tspan6O70401 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tspan6O70401 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tspan6O70401 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.99■□□□□ 0.95
Tspan6O70401 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tspan6O70401 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Gm13241-201ENSMUST00000094493 780 ntBASIC20.98■□□□□ 0.95
Tspan6O70401 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tspan6O70401 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Tspan6O70401 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.97■□□□□ 0.95
Tspan6O70401 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tspan6O70401 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tspan6O70401 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tspan6O70401 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tspan6O70401 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tspan6O70401 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tspan6O70401 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.96■□□□□ 0.95
Tspan6O70401 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Tspan6O70401 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tspan6O70401 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tspan6O70401 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tspan6O70401 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tspan6O70401 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tspan6O70401 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Tspan6O70401 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tspan6O70401 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tspan6O70401 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tspan6O70401 Gm9847-201ENSMUST00000052528 599 ntBASIC20.94■□□□□ 0.94
Tspan6O70401 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tspan6O70401 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tspan6O70401 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.93■□□□□ 0.94
Tspan6O70401 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.93■□□□□ 0.94
Tspan6O70401 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tspan6O70401 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tspan6O70401 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tspan6O70401 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tspan6O70401 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tspan6O70401 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tspan6O70401 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.92■□□□□ 0.94
Tspan6O70401 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tspan6O70401 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tspan6O70401 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tspan6O70401 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
Tspan6O70401 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tspan6O70401 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tspan6O70401 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms