Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.32■■□□□ 1.64
SYN3O14994 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYN3O14994 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYN3O14994 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SYN3O14994 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.32■■□□□ 1.64
SYN3O14994 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYN3O14994 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.32■■□□□ 1.64
SYN3O14994 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SYN3O14994 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SYN3O14994 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYN3O14994 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYN3O14994 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SYN3O14994 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SYN3O14994 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.31■■□□□ 1.64
SYN3O14994 AC011551.1-201ENST00000614101 683 ntBASIC25.31■■□□□ 1.64
SYN3O14994 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYN3O14994 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SYN3O14994 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SYN3O14994 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SYN3O14994 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.3■■□□□ 1.64
SYN3O14994 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.3■■□□□ 1.64
SYN3O14994 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SYN3O14994 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SYN3O14994 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SYN3O14994 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.29■■□□□ 1.64
SYN3O14994 AL356441.2-201ENST00000443009 864 ntBASIC25.29■■□□□ 1.64
SYN3O14994 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.29■■□□□ 1.64
SYN3O14994 MIR4787-201ENST00000607364 84 ntBASIC25.29■■□□□ 1.64
SYN3O14994 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SYN3O14994 MIR4281-201ENST00000580852 62 ntBASIC25.28■■□□□ 1.64
SYN3O14994 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SYN3O14994 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
SYN3O14994 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.28■■□□□ 1.64
SYN3O14994 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.27■■□□□ 1.64
SYN3O14994 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SYN3O14994 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SYN3O14994 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SYN3O14994 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.27■■□□□ 1.64
SYN3O14994 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.26■■□□□ 1.63
SYN3O14994 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.26■■□□□ 1.63
SYN3O14994 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.26■■□□□ 1.63
SYN3O14994 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYN3O14994 AC021242.3-201ENST00000607598 1377 ntBASIC25.26■■□□□ 1.63
SYN3O14994 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SYN3O14994 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SYN3O14994 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.25■■□□□ 1.63
SYN3O14994 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.25■■□□□ 1.63
SYN3O14994 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYN3O14994 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYN3O14994 AC131212.1-201ENST00000613771 668 ntBASIC25.25■■□□□ 1.63
SYN3O14994 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYN3O14994 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SYN3O14994 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.25■■□□□ 1.63
SYN3O14994 AC096887.2-201ENST00000623443 1957 ntBASIC25.24■■□□□ 1.63
SYN3O14994 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.24■■□□□ 1.63
SYN3O14994 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.24■■□□□ 1.63
SYN3O14994 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SYN3O14994 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SYN3O14994 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SYN3O14994 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
SYN3O14994 AL121749.1-202ENST00000609313 2153 ntBASIC25.24■■□□□ 1.63
SYN3O14994 ERN1-208ENST00000606895 2068 ntBASIC25.24■■□□□ 1.63
SYN3O14994 FOXO3B-201ENST00000395675 1928 ntBASIC25.24■■□□□ 1.63
SYN3O14994 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SYN3O14994 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYN3O14994 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.23■■□□□ 1.63
SYN3O14994 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
SYN3O14994 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYN3O14994 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.23■■□□□ 1.63
SYN3O14994 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.23■■□□□ 1.63
SYN3O14994 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.23■■□□□ 1.63
SYN3O14994 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SYN3O14994 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYN3O14994 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SYN3O14994 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SYN3O14994 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SYN3O14994 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.22■■□□□ 1.63
SYN3O14994 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.22■■□□□ 1.63
SYN3O14994 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.22■■□□□ 1.63
SYN3O14994 AC010501.1-201ENST00000606270 1962 ntBASIC25.22■■□□□ 1.63
SYN3O14994 AC097639.1-201ENST00000565519 1891 ntBASIC25.21■■□□□ 1.63
SYN3O14994 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYN3O14994 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.21■■□□□ 1.63
SYN3O14994 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.21■■□□□ 1.63
SYN3O14994 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.21■■□□□ 1.63
SYN3O14994 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.21■■□□□ 1.63
SYN3O14994 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SYN3O14994 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SYN3O14994 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.2■■□□□ 1.63
SYN3O14994 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SYN3O14994 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SYN3O14994 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms