Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC40.04■■■■■ 4
Ccdc180J3QNE4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Ccdc180J3QNE4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC40.03■■■■■ 4
Ccdc180J3QNE4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC40.03■■■■■ 4
Ccdc180J3QNE4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC40.03■■■■■ 4
Ccdc180J3QNE4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Ccdc180J3QNE4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Ccdc180J3QNE4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Ccdc180J3QNE4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC40.02■■■■■ 4
Ccdc180J3QNE4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC40.01■■■■■ 4
Ccdc180J3QNE4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC40.01■■■■□ 3.99
Ccdc180J3QNE4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC40■■■■□ 3.99
Ccdc180J3QNE4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Ccdc180J3QNE4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Ccdc180J3QNE4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
Ccdc180J3QNE4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Ccdc180J3QNE4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Ccdc180J3QNE4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC39.97■■■■□ 3.99
Ccdc180J3QNE4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC39.96■■■■□ 3.99
Ccdc180J3QNE4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC39.96■■■■□ 3.99
Ccdc180J3QNE4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC39.96■■■■□ 3.99
Ccdc180J3QNE4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC39.95■■■■□ 3.99
Ccdc180J3QNE4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Ccdc180J3QNE4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC39.94■■■■□ 3.98
Ccdc180J3QNE4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC39.94■■■■□ 3.98
Ccdc180J3QNE4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Ccdc180J3QNE4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC39.93■■■■□ 3.98
Ccdc180J3QNE4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC39.93■■■■□ 3.98
Ccdc180J3QNE4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Ccdc180J3QNE4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Ccdc180J3QNE4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC39.92■■■■□ 3.98
Ccdc180J3QNE4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Ccdc180J3QNE4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Ccdc180J3QNE4 Gm27454-201ENSMUST00000185090 204 ntBASIC39.91■■■■□ 3.98
Ccdc180J3QNE4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC39.91■■■■□ 3.98
Ccdc180J3QNE4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC39.9■■■■□ 3.98
Ccdc180J3QNE4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC39.9■■■■□ 3.98
Ccdc180J3QNE4 Golgb1-201ENSMUST00000023534 498 ntBASIC39.9■■■■□ 3.98
Ccdc180J3QNE4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
Ccdc180J3QNE4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC39.88■■■■□ 3.98
Ccdc180J3QNE4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
Ccdc180J3QNE4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC39.87■■■■□ 3.97
Ccdc180J3QNE4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
Ccdc180J3QNE4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC39.86■■■■□ 3.97
Ccdc180J3QNE4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC39.86■■■■□ 3.97
Ccdc180J3QNE4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC39.86■■■■□ 3.97
Ccdc180J3QNE4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Ccdc180J3QNE4 Appbp2os-202ENSMUST00000206972 447 ntBASIC39.85■■■■□ 3.97
Ccdc180J3QNE4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Ccdc180J3QNE4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC39.84■■■■□ 3.97
Ccdc180J3QNE4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
Ccdc180J3QNE4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC39.84■■■■□ 3.97
Ccdc180J3QNE4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
Ccdc180J3QNE4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC39.83■■■■□ 3.97
Ccdc180J3QNE4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC39.83■■■■□ 3.97
Ccdc180J3QNE4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
Ccdc180J3QNE4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Ccdc180J3QNE4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC39.8■■■■□ 3.96
Ccdc180J3QNE4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC39.8■■■■□ 3.96
Ccdc180J3QNE4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
Ccdc180J3QNE4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Ccdc180J3QNE4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC39.78■■■■□ 3.96
Ccdc180J3QNE4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Ccdc180J3QNE4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC39.77■■■■□ 3.96
Ccdc180J3QNE4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Ccdc180J3QNE4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Ccdc180J3QNE4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC39.76■■■■□ 3.96
Ccdc180J3QNE4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Ccdc180J3QNE4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
Ccdc180J3QNE4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Gm12821-201ENSMUST00000120022 600 ntBASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 AC140930.3-201ENSMUST00000222935 274 ntBASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC39.75■■■■□ 3.95
Ccdc180J3QNE4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC39.74■■■■□ 3.95
Ccdc180J3QNE4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Ccdc180J3QNE4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Ccdc180J3QNE4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Ccdc180J3QNE4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Ccdc180J3QNE4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC39.73■■■■□ 3.95
Ccdc180J3QNE4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Ccdc180J3QNE4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC39.72■■■■□ 3.95
Ccdc180J3QNE4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC39.72■■■■□ 3.95
Ccdc180J3QNE4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
Ccdc180J3QNE4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC39.71■■■■□ 3.95
Ccdc180J3QNE4 Gm10620-201ENSMUST00000098379 1332 ntBASIC39.71■■■■□ 3.95
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms