Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Hfm1D3Z4R1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31■■■□□ 2.55
Hfm1D3Z4R1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31■■■□□ 2.55
Hfm1D3Z4R1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Hfm1D3Z4R1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC31■■■□□ 2.55
Hfm1D3Z4R1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Hfm1D3Z4R1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
Hfm1D3Z4R1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
Hfm1D3Z4R1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC30.99■■■□□ 2.55
Hfm1D3Z4R1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hfm1D3Z4R1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Hfm1D3Z4R1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC30.97■■■□□ 2.55
Hfm1D3Z4R1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Hfm1D3Z4R1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Hfm1D3Z4R1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC30.96■■■□□ 2.55
Hfm1D3Z4R1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Hfm1D3Z4R1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Hfm1D3Z4R1 Gm10620-201ENSMUST00000098379 1332 ntBASIC30.95■■■□□ 2.55
Hfm1D3Z4R1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC30.95■■■□□ 2.55
Hfm1D3Z4R1 Gm8495-201ENSMUST00000188740 694 ntBASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Hfm1D3Z4R1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC30.94■■■□□ 2.54
Hfm1D3Z4R1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Hfm1D3Z4R1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Hfm1D3Z4R1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC30.94■■■□□ 2.54
Hfm1D3Z4R1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Hfm1D3Z4R1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Hfm1D3Z4R1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC30.92■■■□□ 2.54
Hfm1D3Z4R1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Hfm1D3Z4R1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Hfm1D3Z4R1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Hfm1D3Z4R1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC30.91■■■□□ 2.54
Hfm1D3Z4R1 Gm18284-201ENSMUST00000172604 624 ntBASIC30.91■■■□□ 2.54
Hfm1D3Z4R1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
Hfm1D3Z4R1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC30.91■■■□□ 2.54
Hfm1D3Z4R1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC30.9■■■□□ 2.54
Hfm1D3Z4R1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.9■■■□□ 2.54
Hfm1D3Z4R1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Hfm1D3Z4R1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC30.9■■■□□ 2.54
Hfm1D3Z4R1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Hfm1D3Z4R1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Hfm1D3Z4R1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Hfm1D3Z4R1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Hfm1D3Z4R1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC30.89■■■□□ 2.53
Hfm1D3Z4R1 Gm28731-201ENSMUST00000185564 1569 ntBASIC30.88■■■□□ 2.53
Hfm1D3Z4R1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
Hfm1D3Z4R1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC30.88■■■□□ 2.53
Hfm1D3Z4R1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Hfm1D3Z4R1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
Hfm1D3Z4R1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Gm2011-201ENSMUST00000203124 1263 ntBASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Hfm1D3Z4R1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC30.86■■■□□ 2.53
Hfm1D3Z4R1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30.86■■■□□ 2.53
Hfm1D3Z4R1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Hfm1D3Z4R1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Hfm1D3Z4R1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Hfm1D3Z4R1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Hfm1D3Z4R1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC30.84■■■□□ 2.53
Hfm1D3Z4R1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Hfm1D3Z4R1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Hfm1D3Z4R1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Hfm1D3Z4R1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Hfm1D3Z4R1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Hfm1D3Z4R1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Hfm1D3Z4R1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Hfm1D3Z4R1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms