Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV22A0A0B4J277 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 ABCB10P4-201ENST00000566803 2184 ntBASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV22A0A0B4J277 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 MEST-211ENST00000437945 1455 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 EFS-203ENST00000429593 2610 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV22A0A0B4J277 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 EED-207ENST00000528180 1745 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV22A0A0B4J277 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV22A0A0B4J277 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 LINC00565-201ENST00000562710 2331 ntBASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRAV22A0A0B4J277 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV22A0A0B4J277 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV22A0A0B4J277 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAV22A0A0B4J277 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms