Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Gm15039-201ENSMUST00000118914 875 ntBASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ighv1-42A0A0A6YY38 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-42A0A0A6YY38 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-42A0A0A6YY38 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-42A0A0A6YY38 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-42A0A0A6YY38 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-42A0A0A6YY38 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv1-42A0A0A6YY38 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-42A0A0A6YY38 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Ighv1-42A0A0A6YY38 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.95■□□□□ 0.78
Ighv1-42A0A0A6YY38 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ighv1-42A0A0A6YY38 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ighv1-42A0A0A6YY38 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-42A0A0A6YY38 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ighv1-42A0A0A6YY38 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Gm22238-201ENSMUST00000175222 88 ntBASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-42A0A0A6YY38 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-42A0A0A6YY38 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.9■□□□□ 0.78
Ighv1-42A0A0A6YY38 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-42A0A0A6YY38 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ighv1-42A0A0A6YY38 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-42A0A0A6YY38 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-42A0A0A6YY38 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-42A0A0A6YY38 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-42A0A0A6YY38 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv1-42A0A0A6YY38 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-42A0A0A6YY38 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-42A0A0A6YY38 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-42A0A0A6YY38 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-42A0A0A6YY38 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-42A0A0A6YY38 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-42A0A0A6YY38 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-42A0A0A6YY38 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms