Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav6d-7A0A075B6B0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-7A0A075B6B0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-7A0A075B6B0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trav6d-7A0A075B6B0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav6d-7A0A075B6B0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav6d-7A0A075B6B0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-7A0A075B6B0 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.44■□□□□ 0.22
Trav6d-7A0A075B6B0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-7A0A075B6B0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Gm22567-201ENSMUST00000175542 342 ntBASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-7A0A075B6B0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Gm44428-201ENSMUST00000204474 874 ntBASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-7A0A075B6B0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav6d-7A0A075B6B0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-7A0A075B6B0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav6d-7A0A075B6B0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-7A0A075B6B0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trav6d-7A0A075B6B0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6d-7A0A075B6B0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6d-7A0A075B6B0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav6d-7A0A075B6B0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-7A0A075B6B0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav6d-7A0A075B6B0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-7A0A075B6B0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-7A0A075B6B0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms