Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 PTPN7-213ENST00000486116 551 ntTSL 411.62□□□□□ -0.551e-6■□□□□ 10.7
GTF2F1P35269 PTPN7-208ENST00000476061 550 ntTSL 411.15□□□□□ -0.621e-6■□□□□ 10.7
GTF2F1P35269 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.41■□□□□ 0.541e-10■□□□□ 10.7
GTF2F1P35269 CDC45-208ENST00000471470 857 ntTSL 513.35□□□□□ -0.272e-7■□□□□ 10.7
GTF2F1P35269 BCAM-205ENST00000589558 611 ntTSL 222.49■■□□□ 1.193e-8■□□□□ 10.7
GTF2F1P35269 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.3■□□□□ 0.841e-6■□□□□ 10.7
GTF2F1P35269 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.381e-6■□□□□ 10.7
GTF2F1P35269 KDELR2-205ENST00000463747 376 ntTSL 512.35□□□□□ -0.431e-6■□□□□ 10.7
GTF2F1P35269 KDELR2-202ENST00000382267 583 ntTSL 410.47□□□□□ -0.731e-6■□□□□ 10.7
GTF2F1P35269 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC9.69□□□□□ -0.861e-6■□□□□ 10.7
GTF2F1P35269 KDELR2-204ENST00000462052 382 ntTSL 29.2□□□□□ -0.941e-6■□□□□ 10.7
GTF2F1P35269 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.6■□□□□ 0.894e-6■□□□□ 10.7
GTF2F1P35269 PDLIM7-213ENST00000505074 931 ntTSL 318.51■□□□□ 0.554e-6■□□□□ 10.7
GTF2F1P35269 TRA2A-204ENST00000474586 868 ntTSL 323.86■■□□□ 1.417e-10■□□□□ 10.7
GTF2F1P35269 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.297e-10■□□□□ 10.7
GTF2F1P35269 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.117e-10■□□□□ 10.7
GTF2F1P35269 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.967e-10■□□□□ 10.7
GTF2F1P35269 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.837e-10■□□□□ 10.7
GTF2F1P35269 TRA2A-203ENST00000448549 582 ntTSL 417.69■□□□□ 0.427e-10■□□□□ 10.7
GTF2F1P35269 DOCK6-203ENST00000585904 554 ntTSL 417.35■□□□□ 0.373e-9■□□□□ 10.7
GTF2F1P35269 TRA2A-208ENST00000490942 862 ntTSL 1 (best)16.88■□□□□ 0.297e-10■□□□□ 10.7
GTF2F1P35269 DOCK6-212ENST00000590680 1391 ntTSL 516.64■□□□□ 0.263e-9■□□□□ 10.7
GTF2F1P35269 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.23e-9■□□□□ 10.7
GTF2F1P35269 DOCK6-207ENST00000587656 4009 ntTSL 513.51□□□□□ -0.253e-9■□□□□ 10.7
GTF2F1P35269 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)13.44□□□□□ -0.267e-10■□□□□ 10.7
GTF2F1P35269 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.457e-7■□□□□ 10.7
GTF2F1P35269 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.99■□□□□ 0.157e-7■□□□□ 10.7
GTF2F1P35269 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.564e-7■□□□□ 10.6
GTF2F1P35269 MEX3D-202ENST00000605173 2132 ntAPPRIS ALT2 TSL 1 (best)23.68■■□□□ 1.384e-7■□□□□ 10.6
GTF2F1P35269 ARVCF-211ENST00000495096 2549 ntTSL 222.07■■□□□ 1.124e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.01■■□□□ 1.114e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.944e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-223ENST00000639150 1815 ntTSL 518.65■□□□□ 0.584e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-203ENST00000571698 2276 ntTSL 517.88■□□□□ 0.454e-7■□□□□ 10.6
GTF2F1P35269 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.374e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-229ENST00000639531 2731 ntTSL 514.68□□□□□ -0.064e-7■□□□□ 10.6
GTF2F1P35269 ROR2-204ENST00000493846 370 ntTSL 314.21□□□□□ -0.134e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.364e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.694e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-231ENST00000639853 1425 ntTSL 59.2□□□□□ -0.944e-7■□□□□ 10.6
GTF2F1P35269 ROR2-203ENST00000476440 316 ntTSL 57.14□□□□□ -1.274e-7■□□□□ 10.6
GTF2F1P35269 DUSP11-205ENST00000480948 787 ntTSL 57.01□□□□□ -1.294e-7■□□□□ 10.6
GTF2F1P35269 KANSL1-213ENST00000576248 452 ntTSL 34.4□□□□□ -1.714e-7■□□□□ 10.6
GTF2F1P35269 RPS11-204ENST00000599167 1133 ntTSL 512.53□□□□□ -0.41e-6■□□□□ 10.6
GTF2F1P35269 RPS11-206ENST00000600027 944 ntTSL 512.53□□□□□ -0.41e-6■□□□□ 10.6
GTF2F1P35269 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.711e-6■□□□□ 10.6
GTF2F1P35269 RPS11-209ENST00000602252 751 ntTSL 29.35□□□□□ -0.911e-6■□□□□ 10.6
GTF2F1P35269 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.17□□□□□ -0.941e-6■□□□□ 10.6
GTF2F1P35269 RPS11-208ENST00000601306 547 ntTSL 38.15□□□□□ -1.11e-6■□□□□ 10.6
GTF2F1P35269 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.46□□□□□ -1.221e-6■□□□□ 10.6
GTF2F1P35269 CAMK2N1-202ENST00000489020 812 ntTSL 316.45■□□□□ 0.225e-9■□□□□ 10.6
GTF2F1P35269 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.573e-6■□□□□ 10.6
GTF2F1P35269 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.053e-6■□□□□ 10.6
GTF2F1P35269 HNRNPH3-211ENST00000491200 2308 ntTSL 1 (best)16.72■□□□□ 0.278e-6■□□□□ 10.6
GTF2F1P35269 HNRNPH3-208ENST00000481819 2704 ntTSL 1 (best)16.39■□□□□ 0.218e-6■□□□□ 10.6
GTF2F1P35269 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.866e-8■□□□□ 10.6
GTF2F1P35269 AKT1S1-209ENST00000599525 438 ntTSL 424.65■■□□□ 1.546e-8■□□□□ 10.6
GTF2F1P35269 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.466e-8■□□□□ 10.6
GTF2F1P35269 MRPS25-202ENST00000420267 590 ntTSL 414.29□□□□□ -0.126e-11■□□□□ 10.6
GTF2F1P35269 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.326e-11■□□□□ 10.6
GTF2F1P35269 CYBA-205ENST00000565588 221 ntTSL 211.93□□□□□ -0.56e-11■□□□□ 10.6
GTF2F1P35269 MRPS25-205ENST00000449354 1119 ntTSL 2 BASIC9.83□□□□□ -0.846e-11■□□□□ 10.6
GTF2F1P35269 SPPL2B-206ENST00000593243 551 ntTSL 417.21■□□□□ 0.351e-6■□□□□ 10.5
GTF2F1P35269 GOLGA3-204ENST00000534967 484 ntTSL 330.34■■■□□ 2.452e-6■□□□□ 10.5
GTF2F1P35269 GOLGA3-205ENST00000537317 298 ntTSL 317.34■□□□□ 0.372e-6■□□□□ 10.5
GTF2F1P35269 CHFR-219ENST00000541341 581 ntTSL 312.42□□□□□ -0.422e-6■□□□□ 10.5
GTF2F1P35269 EIF6-205ENST00000440766 798 ntTSL 218.32■□□□□ 0.521e-22■□□□□ 10.5
GTF2F1P35269 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.359e-9■□□□□ 10.5
GTF2F1P35269 ORMDL1-206ENST00000458355 914 ntTSL 321.62■■□□□ 1.059e-9■□□□□ 10.5
GTF2F1P35269 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.439e-9■□□□□ 10.5
GTF2F1P35269 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.76■□□□□ 0.119e-9■□□□□ 10.5
GTF2F1P35269 PRKAR1A-216ENST00000589017 1116 ntTSL 320.68■□□□□ 0.95e-9■□□□□ 10.5
GTF2F1P35269 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.435e-9■□□□□ 10.5
GTF2F1P35269 AC007780.1-201ENST00000590353 719 ntTSL 49.67□□□□□ -0.865e-9■□□□□ 10.5
GTF2F1P35269 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)12.02□□□□□ -0.491e-7■□□□□ 10.5
GTF2F1P35269 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)11.24□□□□□ -0.611e-7■□□□□ 10.5
GTF2F1P35269 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)11.15□□□□□ -0.621e-7■□□□□ 10.5
GTF2F1P35269 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)10.74□□□□□ -0.691e-7■□□□□ 10.5
GTF2F1P35269 CCDC144NL-202ENST00000539177 443 ntTSL 317.03■□□□□ 0.326e-9■□□□□ 10.5
GTF2F1P35269 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.146e-9■□□□□ 10.5
GTF2F1P35269 CCDC144NL-203ENST00000539484 751 ntTSL 310.23□□□□□ -0.776e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC10.02□□□□□ -0.816e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC10.02□□□□□ -0.816e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.71□□□□□ -1.026e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.42□□□□□ -1.066e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.32□□□□□ -1.086e-9■□□□□ 10.5
GTF2F1P35269 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.18□□□□□ -1.96e-9■□□□□ 10.5
GTF2F1P35269 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.028e-41■□□□□ 10.5
GTF2F1P35269 IGF2BP1-203ENST00000499130 568 ntTSL 314.19□□□□□ -0.145e-6■□□□□ 10.5
GTF2F1P35269 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.13e-7■□□□□ 10.4
GTF2F1P35269 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)20.07■□□□□ 0.83e-7■□□□□ 10.4
GTF2F1P35269 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)18.55■□□□□ 0.563e-7■□□□□ 10.4
GTF2F1P35269 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.024e-8■□□□□ 10.4
GTF2F1P35269 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC13.06□□□□□ -0.322e-7■□□□□ 10.4
GTF2F1P35269 LINC00689-204ENST00000447563 3824 ntTSL 1 (best)12.18□□□□□ -0.462e-7■□□□□ 10.4
GTF2F1P35269 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC9.1□□□□□ -0.952e-7■□□□□ 10.4
GTF2F1P35269 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.331e-7■□□□□ 10.4
GTF2F1P35269 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.011e-7■□□□□ 10.4
GTF2F1P35269 NIPA1-205ENST00000560069 575 ntTSL 413.6□□□□□ -0.231e-7■□□□□ 10.4
GTF2F1P35269 NIPA1-204ENST00000559448 2799 ntTSL 212.64□□□□□ -0.391e-7■□□□□ 10.4
Retrieved 100 of 18,214 protein–RNA pairs in 306 ms