Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PCDHA13Q9Y5I0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 AC126177.7-201ENST00000547904 679 ntBASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 CR559946.2-201ENST00000623684 991 ntBASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
PCDHA13Q9Y5I0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDHA13Q9Y5I0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHA13Q9Y5I0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.49■■□□□ 1.67
PCDHA13Q9Y5I0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHA13Q9Y5I0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA13Q9Y5I0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHA13Q9Y5I0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
PCDHA13Q9Y5I0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA13Q9Y5I0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA13Q9Y5I0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA13Q9Y5I0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA13Q9Y5I0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHA13Q9Y5I0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHA13Q9Y5I0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHA13Q9Y5I0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHA13Q9Y5I0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHA13Q9Y5I0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA13Q9Y5I0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA13Q9Y5I0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHA13Q9Y5I0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHA13Q9Y5I0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA13Q9Y5I0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.42■■□□□ 1.66
PCDHA13Q9Y5I0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHA13Q9Y5I0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHA13Q9Y5I0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 MIR3648-2-201ENST00000581792 180 ntBASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 MIR3648-1-201ENST00000615959 180 ntBASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.4■■□□□ 1.66
PCDHA13Q9Y5I0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.39■■□□□ 1.66
PCDHA13Q9Y5I0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
PCDHA13Q9Y5I0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHA13Q9Y5I0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
PCDHA13Q9Y5I0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHA13Q9Y5I0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHA13Q9Y5I0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 LINC00543-201ENST00000567234 1845 ntBASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHA13Q9Y5I0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms