Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
PCDHB13Q9Y5F0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB13Q9Y5F0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHB13Q9Y5F0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.35■■□□□ 1.81
PCDHB13Q9Y5F0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDHB13Q9Y5F0 AC097639.1-201ENST00000565519 1891 ntBASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 SPCS2P3-201ENST00000500401 656 ntBASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 AC129492.7-201ENST00000622992 756 ntBASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHB13Q9Y5F0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB13Q9Y5F0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB13Q9Y5F0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHB13Q9Y5F0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 DUX4L9-201ENST00000449051 1259 ntBASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDHB13Q9Y5F0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB13Q9Y5F0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB13Q9Y5F0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PCDHB13Q9Y5F0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDHB13Q9Y5F0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHB13Q9Y5F0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 MIR6765-201ENST00000614092 87 ntBASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHB13Q9Y5F0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB13Q9Y5F0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDHB13Q9Y5F0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB13Q9Y5F0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB13Q9Y5F0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHB13Q9Y5F0 AC020928.2-201ENST00000588717 2197 ntBASIC26.27■■□□□ 1.8
PCDHB13Q9Y5F0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB13Q9Y5F0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB13Q9Y5F0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.27■■□□□ 1.8
PCDHB13Q9Y5F0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHB13Q9Y5F0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDHB13Q9Y5F0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHB13Q9Y5F0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
PCDHB13Q9Y5F0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHB13Q9Y5F0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 RPS2P7-201ENST00000447334 885 ntBASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PCDHB13Q9Y5F0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB13Q9Y5F0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB13Q9Y5F0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB13Q9Y5F0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHB13Q9Y5F0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDHB13Q9Y5F0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB13Q9Y5F0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHB13Q9Y5F0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHB13Q9Y5F0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHB13Q9Y5F0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.19■■□□□ 1.78
PCDHB13Q9Y5F0 AC087393.1-201ENST00000582896 145 ntBASIC26.19■■□□□ 1.78
PCDHB13Q9Y5F0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHB13Q9Y5F0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms