Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCL1Q9Y2P8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCL1Q9Y2P8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCL1Q9Y2P8 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RCL1Q9Y2P8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.42■□□□□ 0.7
RCL1Q9Y2P8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RCL1Q9Y2P8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RCL1Q9Y2P8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RCL1Q9Y2P8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RCL1Q9Y2P8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.4■□□□□ 0.7
RCL1Q9Y2P8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.4■□□□□ 0.7
RCL1Q9Y2P8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RCL1Q9Y2P8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
RCL1Q9Y2P8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 LINC00543-201ENST00000567234 1845 ntBASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
RCL1Q9Y2P8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCL1Q9Y2P8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RCL1Q9Y2P8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RCL1Q9Y2P8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RCL1Q9Y2P8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.38■□□□□ 0.69
RCL1Q9Y2P8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RCL1Q9Y2P8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 AC079834.2-201ENST00000609776 1949 ntBASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RCL1Q9Y2P8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RCL1Q9Y2P8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RCL1Q9Y2P8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RCL1Q9Y2P8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCL1Q9Y2P8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCL1Q9Y2P8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.33■□□□□ 0.69
RCL1Q9Y2P8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RCL1Q9Y2P8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
RCL1Q9Y2P8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RCL1Q9Y2P8 DUSP8P5-201ENST00000422884 1815 ntBASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 SLC6A10P-202ENST00000431994 2058 ntBASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RCL1Q9Y2P8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms