Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Uchl1Q9R0P9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.04■□□□□ 0.64
Uchl1Q9R0P9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Uchl1Q9R0P9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Uchl1Q9R0P9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Uchl1Q9R0P9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19■□□□□ 0.63
Uchl1Q9R0P9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19■□□□□ 0.63
Uchl1Q9R0P9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Uchl1Q9R0P9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Uchl1Q9R0P9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Uchl1Q9R0P9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.96■□□□□ 0.63
Uchl1Q9R0P9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Uchl1Q9R0P9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Uchl1Q9R0P9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Uchl1Q9R0P9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Uchl1Q9R0P9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Uchl1Q9R0P9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Uchl1Q9R0P9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms