Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Clcn2Q9R0A1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn2Q9R0A1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Clcn2Q9R0A1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Clcn2Q9R0A1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Clcn2Q9R0A1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn2Q9R0A1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Clcn2Q9R0A1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22■■□□□ 1.11
Clcn2Q9R0A1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Clcn2Q9R0A1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.98■■□□□ 1.11
Clcn2Q9R0A1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn2Q9R0A1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Clcn2Q9R0A1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn2Q9R0A1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Clcn2Q9R0A1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Clcn2Q9R0A1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Clcn2Q9R0A1 Gm14523-201ENSMUST00000117260 558 ntBASIC21.97■■□□□ 1.11
Clcn2Q9R0A1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clcn2Q9R0A1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clcn2Q9R0A1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Clcn2Q9R0A1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Clcn2Q9R0A1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Clcn2Q9R0A1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Clcn2Q9R0A1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Gm22567-201ENSMUST00000175542 342 ntBASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Gm44428-201ENSMUST00000204474 874 ntBASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clcn2Q9R0A1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
Clcn2Q9R0A1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Clcn2Q9R0A1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.94■■□□□ 1.1
Clcn2Q9R0A1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Clcn2Q9R0A1 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Clcn2Q9R0A1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.92■■□□□ 1.1
Clcn2Q9R0A1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clcn2Q9R0A1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Clcn2Q9R0A1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.89■■□□□ 1.09
Clcn2Q9R0A1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms