Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC022517.1-201ENST00000592429 346 ntBASIC22.87■■□□□ 1.25
CHD8Q9HCK8 AL136162.1-201ENST00000607711 1078 ntBASIC22.87■■□□□ 1.25
CHD8Q9HCK8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD8Q9HCK8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHD8Q9HCK8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.87■■□□□ 1.25
CHD8Q9HCK8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CHD8Q9HCK8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CHD8Q9HCK8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHD8Q9HCK8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD8Q9HCK8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD8Q9HCK8 AP001330.3-201ENST00000520123 633 ntBASIC22.86■■□□□ 1.25
CHD8Q9HCK8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHD8Q9HCK8 WHAMMP3-201ENST00000611636 1609 ntBASIC22.86■■□□□ 1.25
CHD8Q9HCK8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CHD8Q9HCK8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHD8Q9HCK8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHD8Q9HCK8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.83■■□□□ 1.24
CHD8Q9HCK8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CHD8Q9HCK8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHD8Q9HCK8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.82■■□□□ 1.24
CHD8Q9HCK8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.82■■□□□ 1.24
CHD8Q9HCK8 RASA4CP-201ENST00000424092 1398 ntBASIC22.82■■□□□ 1.24
CHD8Q9HCK8 AC034268.1-201ENST00000441047 882 ntBASIC22.82■■□□□ 1.24
CHD8Q9HCK8 AC092437.1-201ENST00000624794 1048 ntBASIC22.82■■□□□ 1.24
CHD8Q9HCK8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD8Q9HCK8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CHD8Q9HCK8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CHD8Q9HCK8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 AC091305.1-201ENST00000479476 895 ntBASIC22.8■■□□□ 1.24
CHD8Q9HCK8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CHD8Q9HCK8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD8Q9HCK8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
CHD8Q9HCK8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CHD8Q9HCK8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.79■■□□□ 1.24
CHD8Q9HCK8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
CHD8Q9HCK8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CHD8Q9HCK8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.77■■□□□ 1.24
CHD8Q9HCK8 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.77■■□□□ 1.24
CHD8Q9HCK8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CHD8Q9HCK8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.76■■□□□ 1.23
CHD8Q9HCK8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.76■■□□□ 1.23
CHD8Q9HCK8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.76■■□□□ 1.23
CHD8Q9HCK8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.76■■□□□ 1.23
CHD8Q9HCK8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CHD8Q9HCK8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CHD8Q9HCK8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHD8Q9HCK8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CHD8Q9HCK8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.73■■□□□ 1.23
CHD8Q9HCK8 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.73■■□□□ 1.23
CHD8Q9HCK8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHD8Q9HCK8 ABHD17AP1-201ENST00000358206 933 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms