Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHMP4BQ9H444 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHMP4BQ9H444 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHMP4BQ9H444 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CHMP4BQ9H444 AC142381.3-201ENST00000568208 1670 ntBASIC30.11■■■□□ 2.41
CHMP4BQ9H444 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHMP4BQ9H444 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.11■■■□□ 2.41
CHMP4BQ9H444 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHMP4BQ9H444 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CHMP4BQ9H444 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHMP4BQ9H444 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHMP4BQ9H444 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHMP4BQ9H444 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHMP4BQ9H444 AC133552.2-201ENST00000619106 1032 ntBASIC30.09■■■□□ 2.41
CHMP4BQ9H444 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CHMP4BQ9H444 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHMP4BQ9H444 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHMP4BQ9H444 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHMP4BQ9H444 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHMP4BQ9H444 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 AC009831.1-201ENST00000580420 1582 ntBASIC30.07■■■□□ 2.4
CHMP4BQ9H444 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.07■■■□□ 2.4
CHMP4BQ9H444 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHMP4BQ9H444 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHMP4BQ9H444 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CHMP4BQ9H444 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.06■■■□□ 2.4
CHMP4BQ9H444 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHMP4BQ9H444 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHMP4BQ9H444 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CHMP4BQ9H444 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CHMP4BQ9H444 HSD17B1P1-201ENST00000590052 955 ntBASIC30.05■■■□□ 2.4
CHMP4BQ9H444 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CHMP4BQ9H444 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 RARRES2P2-201ENST00000394842 485 ntBASIC30.04■■■□□ 2.4
CHMP4BQ9H444 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 AC022211.4-201ENST00000625094 2161 ntBASIC30.04■■■□□ 2.4
CHMP4BQ9H444 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CHMP4BQ9H444 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHMP4BQ9H444 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CHMP4BQ9H444 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CHMP4BQ9H444 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHMP4BQ9H444 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.03■■■□□ 2.4
CHMP4BQ9H444 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHMP4BQ9H444 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHMP4BQ9H444 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.02■■■□□ 2.4
CHMP4BQ9H444 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHMP4BQ9H444 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
CHMP4BQ9H444 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CHMP4BQ9H444 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.01■■■□□ 2.39
CHMP4BQ9H444 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.01■■■□□ 2.39
CHMP4BQ9H444 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.01■■■□□ 2.39
CHMP4BQ9H444 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CHMP4BQ9H444 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CHMP4BQ9H444 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30■■■□□ 2.39
CHMP4BQ9H444 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHMP4BQ9H444 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHMP4BQ9H444 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CHMP4BQ9H444 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHMP4BQ9H444 SLC6A10P-202ENST00000431994 2058 ntBASIC29.97■■■□□ 2.39
CHMP4BQ9H444 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHMP4BQ9H444 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHMP4BQ9H444 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
CHMP4BQ9H444 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHMP4BQ9H444 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
CHMP4BQ9H444 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.39
CHMP4BQ9H444 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
CHMP4BQ9H444 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.95■■■□□ 2.39
CHMP4BQ9H444 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHMP4BQ9H444 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CHMP4BQ9H444 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.38
CHMP4BQ9H444 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
CHMP4BQ9H444 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.95■■■□□ 2.38
CHMP4BQ9H444 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHMP4BQ9H444 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHMP4BQ9H444 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHMP4BQ9H444 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHMP4BQ9H444 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC29.94■■■□□ 2.38
CHMP4BQ9H444 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.94■■■□□ 2.38
CHMP4BQ9H444 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms