Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHAC1Q9H158 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHAC1Q9H158 AC012676.1-201ENST00000574705 1949 ntBASIC22.69■■□□□ 1.22
PCDHAC1Q9H158 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHAC1Q9H158 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHAC1Q9H158 AP003733.4-201ENST00000623785 1697 ntBASIC22.68■■□□□ 1.22
PCDHAC1Q9H158 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHAC1Q9H158 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHAC1Q9H158 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHAC1Q9H158 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDHAC1Q9H158 AC068473.5-201ENST00000616428 2072 ntBASIC22.67■■□□□ 1.22
PCDHAC1Q9H158 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 AC097639.1-201ENST00000565519 1891 ntBASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHAC1Q9H158 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 RPS2P35-201ENST00000443417 897 ntBASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCDHAC1Q9H158 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PCDHAC1Q9H158 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHAC1Q9H158 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC1Q9H158 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDHAC1Q9H158 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PCDHAC1Q9H158 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDHAC1Q9H158 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHAC1Q9H158 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDHAC1Q9H158 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
PCDHAC1Q9H158 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHAC1Q9H158 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 SLC6A10P-202ENST00000431994 2058 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L13-201ENST00000554103 1267 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L15-201ENST00000611059 1267 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L23-201ENST00000615195 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L24-201ENST00000617576 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L22-201ENST00000618238 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L20-201ENST00000619712 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L21-201ENST00000622058 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L10-201ENST00000622460 1267 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 DUX4L25-201ENST00000624915 1269 ntBASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHAC1Q9H158 LINC00543-201ENST00000567234 1845 ntBASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHAC1Q9H158 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PCDHAC1Q9H158 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHAC1Q9H158 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHAC1Q9H158 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHAC1Q9H158 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC1Q9H158 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHAC1Q9H158 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
PCDHAC1Q9H158 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDHAC1Q9H158 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHAC1Q9H158 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 AC008813.1-201ENST00000536597 885 ntBASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHAC1Q9H158 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHAC1Q9H158 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHAC1Q9H158 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHAC1Q9H158 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.56■■□□□ 1.2
PCDHAC1Q9H158 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHAC1Q9H158 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms