Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx2-4Q9EQM3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Nkx2-4Q9EQM3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx2-4Q9EQM3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nkx2-4Q9EQM3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nkx2-4Q9EQM3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx2-4Q9EQM3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.59■■□□□ 1.21
Nkx2-4Q9EQM3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx2-4Q9EQM3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx2-4Q9EQM3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nkx2-4Q9EQM3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-4Q9EQM3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.58■■□□□ 1.21
Nkx2-4Q9EQM3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-4Q9EQM3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-4Q9EQM3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nkx2-4Q9EQM3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Nkx2-4Q9EQM3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nkx2-4Q9EQM3 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.56■■□□□ 1.2
Nkx2-4Q9EQM3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx2-4Q9EQM3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nkx2-4Q9EQM3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.56■■□□□ 1.2
Nkx2-4Q9EQM3 Gm18284-201ENSMUST00000172604 624 ntBASIC22.56■■□□□ 1.2
Nkx2-4Q9EQM3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-4Q9EQM3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-4Q9EQM3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-4Q9EQM3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-4Q9EQM3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nkx2-4Q9EQM3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-4Q9EQM3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-4Q9EQM3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-4Q9EQM3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Nkx2-4Q9EQM3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.51■■□□□ 1.19
Nkx2-4Q9EQM3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.51■■□□□ 1.19
Nkx2-4Q9EQM3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Nkx2-4Q9EQM3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.51■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Nkx2-4Q9EQM3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Nkx2-4Q9EQM3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Gm29257-201ENSMUST00000186115 639 ntBASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.49■■□□□ 1.19
Nkx2-4Q9EQM3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.48■■□□□ 1.19
Nkx2-4Q9EQM3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Nkx2-4Q9EQM3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Nkx2-4Q9EQM3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.46■■□□□ 1.19
Nkx2-4Q9EQM3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Nkx2-4Q9EQM3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.46■■□□□ 1.19
Nkx2-4Q9EQM3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Nkx2-4Q9EQM3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Nkx2-4Q9EQM3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Nkx2-4Q9EQM3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Nkx2-4Q9EQM3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Nkx2-4Q9EQM3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Nkx2-4Q9EQM3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Nkx2-4Q9EQM3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Nkx2-4Q9EQM3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms