Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmem54Q9D7S1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmem54Q9D7S1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmem54Q9D7S1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tmem54Q9D7S1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tmem54Q9D7S1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tmem54Q9D7S1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem54Q9D7S1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.93■□□□□ 0.62
Tmem54Q9D7S1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tmem54Q9D7S1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Tmem54Q9D7S1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tmem54Q9D7S1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmem54Q9D7S1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmem54Q9D7S1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tmem54Q9D7S1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tmem54Q9D7S1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tmem54Q9D7S1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem54Q9D7S1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem54Q9D7S1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem54Q9D7S1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tmem54Q9D7S1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.88■□□□□ 0.61
Tmem54Q9D7S1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tmem54Q9D7S1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Tmem54Q9D7S1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms