Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg3Q9CQV4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg3Q9CQV4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg3Q9CQV4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retreg3Q9CQV4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retreg3Q9CQV4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retreg3Q9CQV4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Retreg3Q9CQV4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retreg3Q9CQV4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg3Q9CQV4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg3Q9CQV4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg3Q9CQV4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Retreg3Q9CQV4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg3Q9CQV4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg3Q9CQV4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg3Q9CQV4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg3Q9CQV4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg3Q9CQV4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.71■■□□□ 1.07
Retreg3Q9CQV4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg3Q9CQV4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg3Q9CQV4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Retreg3Q9CQV4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.7■■□□□ 1.06
Retreg3Q9CQV4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retreg3Q9CQV4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.7■■□□□ 1.06
Retreg3Q9CQV4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retreg3Q9CQV4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Retreg3Q9CQV4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg3Q9CQV4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.68■■□□□ 1.06
Retreg3Q9CQV4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Gm15546-201ENSMUST00000122095 826 ntBASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg3Q9CQV4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg3Q9CQV4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms