Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.9■□□□□ 0.62
Scrt1Q99M85 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scrt1Q99M85 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scrt1Q99M85 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scrt1Q99M85 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scrt1Q99M85 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scrt1Q99M85 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Gm21956-201ENSMUST00000179946 522 ntBASIC18.88■□□□□ 0.61
Scrt1Q99M85 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.88■□□□□ 0.61
Scrt1Q99M85 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Gm7417-201ENSMUST00000192950 473 ntBASIC18.87■□□□□ 0.61
Scrt1Q99M85 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scrt1Q99M85 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scrt1Q99M85 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Scrt1Q99M85 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Scrt1Q99M85 Gm13241-201ENSMUST00000094493 780 ntBASIC18.86■□□□□ 0.61
Scrt1Q99M85 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scrt1Q99M85 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scrt1Q99M85 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scrt1Q99M85 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scrt1Q99M85 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scrt1Q99M85 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scrt1Q99M85 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scrt1Q99M85 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scrt1Q99M85 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scrt1Q99M85 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Scrt1Q99M85 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scrt1Q99M85 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scrt1Q99M85 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scrt1Q99M85 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.83■□□□□ 0.6
Scrt1Q99M85 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scrt1Q99M85 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.82■□□□□ 0.6
Scrt1Q99M85 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scrt1Q99M85 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Gm9847-201ENSMUST00000052528 599 ntBASIC18.81■□□□□ 0.6
Scrt1Q99M85 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scrt1Q99M85 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Scrt1Q99M85 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scrt1Q99M85 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Scrt1Q99M85 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scrt1Q99M85 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scrt1Q99M85 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms