Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cdca3Q99M54 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.92■□□□□ 0.78
Cdca3Q99M54 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdca3Q99M54 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cdca3Q99M54 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdca3Q99M54 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Cdca3Q99M54 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdca3Q99M54 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdca3Q99M54 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Cdca3Q99M54 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Gm14117-201ENSMUST00000122417 843 ntBASIC19.89■□□□□ 0.77
Cdca3Q99M54 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdca3Q99M54 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdca3Q99M54 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdca3Q99M54 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Cdca3Q99M54 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdca3Q99M54 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdca3Q99M54 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdca3Q99M54 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cdca3Q99M54 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdca3Q99M54 Gm43566-201ENSMUST00000196851 808 ntBASIC19.87■□□□□ 0.77
Cdca3Q99M54 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cdca3Q99M54 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdca3Q99M54 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdca3Q99M54 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdca3Q99M54 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdca3Q99M54 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdca3Q99M54 Gm45102-201ENSMUST00000207427 857 ntBASIC19.86■□□□□ 0.77
Cdca3Q99M54 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdca3Q99M54 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cdca3Q99M54 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.86■□□□□ 0.77
Cdca3Q99M54 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Gm13238-201ENSMUST00000117655 780 ntBASIC19.85■□□□□ 0.77
Cdca3Q99M54 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.85■□□□□ 0.77
Cdca3Q99M54 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdca3Q99M54 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cdca3Q99M54 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdca3Q99M54 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cdca3Q99M54 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdca3Q99M54 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdca3Q99M54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdca3Q99M54 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.83■□□□□ 0.77
Cdca3Q99M54 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdca3Q99M54 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdca3Q99M54 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Cdca3Q99M54 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdca3Q99M54 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Gm45444-201ENSMUST00000211394 898 ntBASIC19.82■□□□□ 0.76
Cdca3Q99M54 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdca3Q99M54 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.81■□□□□ 0.76
Cdca3Q99M54 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdca3Q99M54 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdca3Q99M54 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms