Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
SCAF11Q99590 AC092028.1-203ENST00000608262 953 ntBASIC34.9■■■■□ 3.18
SCAF11Q99590 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC34.89■■■■□ 3.18
SCAF11Q99590 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.89■■■■□ 3.18
SCAF11Q99590 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC34.89■■■■□ 3.18
SCAF11Q99590 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC34.88■■■■□ 3.17
SCAF11Q99590 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
SCAF11Q99590 AC120024.1-201ENST00000562672 995 ntBASIC34.88■■■■□ 3.17
SCAF11Q99590 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
SCAF11Q99590 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
SCAF11Q99590 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC34.86■■■■□ 3.17
SCAF11Q99590 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC34.86■■■■□ 3.17
SCAF11Q99590 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SCAF11Q99590 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC34.85■■■■□ 3.17
SCAF11Q99590 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC34.85■■■■□ 3.17
SCAF11Q99590 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC34.85■■■■□ 3.17
SCAF11Q99590 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
SCAF11Q99590 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SCAF11Q99590 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC34.84■■■■□ 3.17
SCAF11Q99590 KRT18P10-201ENST00000388836 1287 ntBASIC34.84■■■■□ 3.17
SCAF11Q99590 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC34.84■■■■□ 3.17
SCAF11Q99590 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC34.84■■■■□ 3.17
SCAF11Q99590 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SCAF11Q99590 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
SCAF11Q99590 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
SCAF11Q99590 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC34.82■■■■□ 3.16
SCAF11Q99590 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.16
SCAF11Q99590 MIR3621-201ENST00000580529 85 ntBASIC34.82■■■■□ 3.16
SCAF11Q99590 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
SCAF11Q99590 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC34.82■■■■□ 3.16
SCAF11Q99590 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF11Q99590 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
SCAF11Q99590 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC34.8■■■■□ 3.16
SCAF11Q99590 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF11Q99590 AC005837.3-201ENST00000612163 286 ntBASIC34.8■■■■□ 3.16
SCAF11Q99590 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF11Q99590 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF11Q99590 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
SCAF11Q99590 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF11Q99590 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC34.79■■■■□ 3.16
SCAF11Q99590 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
SCAF11Q99590 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF11Q99590 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF11Q99590 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SCAF11Q99590 AC096631.2-201ENST00000436136 790 ntBASIC34.78■■■■□ 3.16
SCAF11Q99590 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC34.78■■■■□ 3.16
SCAF11Q99590 MIR4281-201ENST00000580852 62 ntBASIC34.78■■■■□ 3.16
SCAF11Q99590 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF11Q99590 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF11Q99590 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC34.78■■■■□ 3.16
SCAF11Q99590 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SCAF11Q99590 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
SCAF11Q99590 AL449106.1-201ENST00000608517 1980 ntBASIC34.77■■■■□ 3.16
SCAF11Q99590 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC34.77■■■■□ 3.16
SCAF11Q99590 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SCAF11Q99590 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
SCAF11Q99590 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
SCAF11Q99590 MIR4466-201ENST00000606121 54 ntBASIC34.76■■■■□ 3.15
SCAF11Q99590 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
SCAF11Q99590 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC34.75■■■■□ 3.15
SCAF11Q99590 BX255925.1-201ENST00000566954 1854 ntBASIC34.74■■■■□ 3.15
SCAF11Q99590 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC34.74■■■■□ 3.15
SCAF11Q99590 GUK1-205ENST00000366722 850 ntTSL 3 BASIC34.74■■■■□ 3.15
SCAF11Q99590 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC34.74■■■■□ 3.15
SCAF11Q99590 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC34.74■■■■□ 3.15
SCAF11Q99590 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
SCAF11Q99590 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
SCAF11Q99590 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
SCAF11Q99590 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
SCAF11Q99590 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
SCAF11Q99590 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
SCAF11Q99590 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
SCAF11Q99590 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF11Q99590 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
SCAF11Q99590 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF11Q99590 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC34.72■■■■□ 3.15
SCAF11Q99590 RARRES2P6-201ENST00000567333 442 ntBASIC34.72■■■■□ 3.15
SCAF11Q99590 MIR6724-1-201ENST00000616420 92 ntBASIC34.72■■■■□ 3.15
SCAF11Q99590 MIR6724-2-201ENST00000616483 92 ntBASIC34.72■■■■□ 3.15
SCAF11Q99590 MIR6724-4-201ENST00000617390 92 ntBASIC34.72■■■■□ 3.15
SCAF11Q99590 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
SCAF11Q99590 MIR6724-3-201ENST00000622482 92 ntBASIC34.72■■■■□ 3.15
SCAF11Q99590 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC34.72■■■■□ 3.15
SCAF11Q99590 AC133561.4-201ENST00000566112 224 ntBASIC34.71■■■■□ 3.15
SCAF11Q99590 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC34.71■■■■□ 3.15
SCAF11Q99590 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
SCAF11Q99590 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
SCAF11Q99590 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SCAF11Q99590 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SCAF11Q99590 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.15
SCAF11Q99590 AC142086.6-201ENST00000621154 1765 ntBASIC34.7■■■■□ 3.15
SCAF11Q99590 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC34.7■■■■□ 3.15
SCAF11Q99590 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC34.7■■■■□ 3.15
SCAF11Q99590 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC34.7■■■■□ 3.15
SCAF11Q99590 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC34.7■■■■□ 3.15
SCAF11Q99590 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.14
SCAF11Q99590 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
SCAF11Q99590 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
SCAF11Q99590 AL512631.2-201ENST00000604634 923 ntBASIC34.69■■■■□ 3.14
SCAF11Q99590 AC010997.5-201ENST00000609182 354 ntBASIC34.69■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms