Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RARRES2P1-201ENST00000474487 481 ntBASIC25.67■■□□□ 1.7
ZNF560Q96MR9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 ERN1-208ENST00000606895 2068 ntBASIC25.67■■□□□ 1.7
ZNF560Q96MR9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.67■■□□□ 1.7
ZNF560Q96MR9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 AC010501.1-201ENST00000606270 1962 ntBASIC25.66■■□□□ 1.7
ZNF560Q96MR9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ZNF560Q96MR9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ZNF560Q96MR9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 KRT8P33-201ENST00000508125 1423 ntBASIC25.64■■□□□ 1.7
ZNF560Q96MR9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.64■■□□□ 1.7
ZNF560Q96MR9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ZNF560Q96MR9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
ZNF560Q96MR9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
ZNF560Q96MR9 YBX1P4-201ENST00000392794 808 ntBASIC25.63■■□□□ 1.69
ZNF560Q96MR9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.63■■□□□ 1.69
ZNF560Q96MR9 MIR4508-201ENST00000584178 70 ntBASIC25.63■■□□□ 1.69
ZNF560Q96MR9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ZNF560Q96MR9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
ZNF560Q96MR9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
ZNF560Q96MR9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ZNF560Q96MR9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF560Q96MR9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.62■■□□□ 1.69
ZNF560Q96MR9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ZNF560Q96MR9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 AC096887.2-201ENST00000623443 1957 ntBASIC25.61■■□□□ 1.69
ZNF560Q96MR9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ZNF560Q96MR9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ZNF560Q96MR9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.59■■□□□ 1.69
ZNF560Q96MR9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF560Q96MR9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ZNF560Q96MR9 AC103834.1-201ENST00000520383 144 ntBASIC25.59■■□□□ 1.69
ZNF560Q96MR9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
ZNF560Q96MR9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
ZNF560Q96MR9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF560Q96MR9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF560Q96MR9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF560Q96MR9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ZNF560Q96MR9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
ZNF560Q96MR9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.57■■□□□ 1.68
ZNF560Q96MR9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ZNF560Q96MR9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 AC022616.5-201ENST00000518796 181 ntBASIC25.56■■□□□ 1.68
ZNF560Q96MR9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ZNF560Q96MR9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
ZNF560Q96MR9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.55■■□□□ 1.68
ZNF560Q96MR9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
ZNF560Q96MR9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZNF560Q96MR9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZNF560Q96MR9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.54■■□□□ 1.68
ZNF560Q96MR9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF560Q96MR9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.53■■□□□ 1.68
ZNF560Q96MR9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF560Q96MR9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF560Q96MR9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZNF560Q96MR9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.52■■□□□ 1.68
ZNF560Q96MR9 DUSP8P4-201ENST00000399538 1761 ntBASIC25.52■■□□□ 1.68
ZNF560Q96MR9 AC097639.1-201ENST00000565519 1891 ntBASIC25.52■■□□□ 1.68
ZNF560Q96MR9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms