Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.67■□□□□ 0.9
SEH1LQ96EE3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEH1LQ96EE3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SEH1LQ96EE3 GPX1-201ENST00000419349 1106 ntBASIC20.66■□□□□ 0.9
SEH1LQ96EE3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.66■□□□□ 0.9
SEH1LQ96EE3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEH1LQ96EE3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.66■□□□□ 0.9
SEH1LQ96EE3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEH1LQ96EE3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEH1LQ96EE3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SEH1LQ96EE3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEH1LQ96EE3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEH1LQ96EE3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEH1LQ96EE3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEH1LQ96EE3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEH1LQ96EE3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SEH1LQ96EE3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEH1LQ96EE3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.63■□□□□ 0.89
SEH1LQ96EE3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SEH1LQ96EE3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 AC092296.2-201ENST00000589470 999 ntBASIC20.61■□□□□ 0.89
SEH1LQ96EE3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEH1LQ96EE3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.6■□□□□ 0.89
SEH1LQ96EE3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEH1LQ96EE3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEH1LQ96EE3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEH1LQ96EE3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEH1LQ96EE3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEH1LQ96EE3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEH1LQ96EE3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEH1LQ96EE3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEH1LQ96EE3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SEH1LQ96EE3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SEH1LQ96EE3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEH1LQ96EE3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.57■□□□□ 0.88
SEH1LQ96EE3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.57■□□□□ 0.88
SEH1LQ96EE3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEH1LQ96EE3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms