Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rab40bQ8VHP8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Rab40bQ8VHP8 Gm6821-201ENSMUST00000107540 542 ntBASIC19.43■□□□□ 0.7
Rab40bQ8VHP8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab40bQ8VHP8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab40bQ8VHP8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab40bQ8VHP8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab40bQ8VHP8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Terc-201ENSMUST00000082862 423 ntBASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rab40bQ8VHP8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rab40bQ8VHP8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab40bQ8VHP8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.39■□□□□ 0.69
Rab40bQ8VHP8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rab40bQ8VHP8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.39■□□□□ 0.69
Rab40bQ8VHP8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab40bQ8VHP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab40bQ8VHP8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rab40bQ8VHP8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab40bQ8VHP8 Mir3960-201ENSMUST00000198213 73 ntBASIC19.38■□□□□ 0.69
Rab40bQ8VHP8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rab40bQ8VHP8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab40bQ8VHP8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rab40bQ8VHP8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40bQ8VHP8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rab40bQ8VHP8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rab40bQ8VHP8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab40bQ8VHP8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab40bQ8VHP8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab40bQ8VHP8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40bQ8VHP8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40bQ8VHP8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40bQ8VHP8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40bQ8VHP8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rab40bQ8VHP8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab40bQ8VHP8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rab40bQ8VHP8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab40bQ8VHP8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rab40bQ8VHP8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rab40bQ8VHP8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rab40bQ8VHP8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.31■□□□□ 0.68
Rab40bQ8VHP8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms