Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Rpa1Q8VEE4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.64■■□□□ 1.06
Rpa1Q8VEE4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
Rpa1Q8VEE4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Rpa1Q8VEE4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rpa1Q8VEE4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rpa1Q8VEE4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rpa1Q8VEE4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpa1Q8VEE4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Rpa1Q8VEE4 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.63■■□□□ 1.05
Rpa1Q8VEE4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpa1Q8VEE4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa1Q8VEE4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa1Q8VEE4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa1Q8VEE4 Gm6821-201ENSMUST00000107540 542 ntBASIC21.62■■□□□ 1.05
Rpa1Q8VEE4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpa1Q8VEE4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rpa1Q8VEE4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rpa1Q8VEE4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Rpa1Q8VEE4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.6■■□□□ 1.05
Rpa1Q8VEE4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rpa1Q8VEE4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rpa1Q8VEE4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rpa1Q8VEE4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rpa1Q8VEE4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rpa1Q8VEE4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rpa1Q8VEE4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rpa1Q8VEE4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rpa1Q8VEE4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpa1Q8VEE4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rpa1Q8VEE4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rpa1Q8VEE4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rpa1Q8VEE4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rpa1Q8VEE4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.54■■□□□ 1.04
Rpa1Q8VEE4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpa1Q8VEE4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpa1Q8VEE4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpa1Q8VEE4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpa1Q8VEE4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rpa1Q8VEE4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rpa1Q8VEE4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms