Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r228Q8R2A7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vmn1r228Q8R2A7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r228Q8R2A7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r228Q8R2A7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r228Q8R2A7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r228Q8R2A7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r228Q8R2A7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.67■□□□□ 0.58
Vmn1r228Q8R2A7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r228Q8R2A7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r228Q8R2A7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r228Q8R2A7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r228Q8R2A7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vmn1r228Q8R2A7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Vmn1r228Q8R2A7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vmn1r228Q8R2A7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vmn1r228Q8R2A7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vmn1r228Q8R2A7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r228Q8R2A7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r228Q8R2A7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r228Q8R2A7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r228Q8R2A7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r228Q8R2A7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r228Q8R2A7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r228Q8R2A7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vmn1r228Q8R2A7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vmn1r228Q8R2A7 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.58■□□□□ 0.56
Vmn1r228Q8R2A7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r228Q8R2A7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r228Q8R2A7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r228Q8R2A7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.58■□□□□ 0.56
Vmn1r228Q8R2A7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vmn1r228Q8R2A7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms