Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Atf7Q8R0S1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Atf7Q8R0S1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Atf7Q8R0S1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.61■■□□□ 1.69
Atf7Q8R0S1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Atf7Q8R0S1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Atf7Q8R0S1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Atf7Q8R0S1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Atf7Q8R0S1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Atf7Q8R0S1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.59■■□□□ 1.69
Atf7Q8R0S1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Atf7Q8R0S1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Atf7Q8R0S1 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.58■■□□□ 1.68
Atf7Q8R0S1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Atf7Q8R0S1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Atf7Q8R0S1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
Atf7Q8R0S1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Atf7Q8R0S1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Atf7Q8R0S1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.57■■□□□ 1.68
Atf7Q8R0S1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Atf7Q8R0S1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atf7Q8R0S1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atf7Q8R0S1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atf7Q8R0S1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atf7Q8R0S1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.55■■□□□ 1.68
Atf7Q8R0S1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atf7Q8R0S1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Atf7Q8R0S1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atf7Q8R0S1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atf7Q8R0S1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.52■■□□□ 1.68
Atf7Q8R0S1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.52■■□□□ 1.68
Atf7Q8R0S1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atf7Q8R0S1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atf7Q8R0S1 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.51■■□□□ 1.67
Atf7Q8R0S1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.51■■□□□ 1.67
Atf7Q8R0S1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Atf7Q8R0S1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atf7Q8R0S1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25.51■■□□□ 1.67
Atf7Q8R0S1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atf7Q8R0S1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.5■■□□□ 1.67
Atf7Q8R0S1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.5■■□□□ 1.67
Atf7Q8R0S1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Atf7Q8R0S1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Atf7Q8R0S1 Gm10420-201ENSMUST00000121713 882 ntBASIC25.49■■□□□ 1.67
Atf7Q8R0S1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Atf7Q8R0S1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.49■■□□□ 1.67
Atf7Q8R0S1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.49■■□□□ 1.67
Atf7Q8R0S1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atf7Q8R0S1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC25.48■■□□□ 1.67
Atf7Q8R0S1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.48■■□□□ 1.67
Atf7Q8R0S1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atf7Q8R0S1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atf7Q8R0S1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Atf7Q8R0S1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atf7Q8R0S1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atf7Q8R0S1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atf7Q8R0S1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
Atf7Q8R0S1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Atf7Q8R0S1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atf7Q8R0S1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Atf7Q8R0S1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.67
Atf7Q8R0S1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
Atf7Q8R0S1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Atf7Q8R0S1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 179.7 ms