Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDND2Q8NHS1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDND2Q8NHS1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDND2Q8NHS1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDND2Q8NHS1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDND2Q8NHS1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDND2Q8NHS1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDND2Q8NHS1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDND2Q8NHS1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDND2Q8NHS1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 AC091060.1-201ENST00000623524 1766 ntBASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 MIR4508-201ENST00000584178 70 ntBASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDND2Q8NHS1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CLDND2Q8NHS1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLDND2Q8NHS1 AC087393.1-201ENST00000582896 145 ntBASIC20.18■□□□□ 0.82
CLDND2Q8NHS1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLDND2Q8NHS1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDND2Q8NHS1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 AC142472.1-201ENST00000612013 1741 ntBASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 RPS2P7-201ENST00000447334 885 ntBASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 AC020928.2-201ENST00000588717 2197 ntBASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLDND2Q8NHS1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CLDND2Q8NHS1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDND2Q8NHS1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDND2Q8NHS1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLDND2Q8NHS1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDND2Q8NHS1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDND2Q8NHS1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 AC009299.2-201ENST00000482477 511 ntBASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDND2Q8NHS1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 AC019171.1-201ENST00000601251 1056 ntBASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDND2Q8NHS1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 AC093323.1-202ENST00000635031 2045 ntBASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 AP004609.3-201ENST00000610705 1884 ntBASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDND2Q8NHS1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms