Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
RETREG2Q8NC44 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.92
RETREG2Q8NC44 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RETREG2Q8NC44 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RETREG2Q8NC44 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RETREG2Q8NC44 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.06■■□□□ 1.92
RETREG2Q8NC44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RETREG2Q8NC44 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RETREG2Q8NC44 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.05■■□□□ 1.92
RETREG2Q8NC44 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RETREG2Q8NC44 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RETREG2Q8NC44 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RETREG2Q8NC44 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 AC019069.1-201ENST00000610008 1333 ntBASIC27.03■■□□□ 1.92
RETREG2Q8NC44 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
RETREG2Q8NC44 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RETREG2Q8NC44 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RETREG2Q8NC44 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RETREG2Q8NC44 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RETREG2Q8NC44 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RETREG2Q8NC44 AC019171.1-201ENST00000601251 1056 ntBASIC27.02■■□□□ 1.92
RETREG2Q8NC44 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RETREG2Q8NC44 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RETREG2Q8NC44 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RETREG2Q8NC44 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27■■□□□ 1.91
RETREG2Q8NC44 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27■■□□□ 1.91
RETREG2Q8NC44 AP004609.3-201ENST00000610705 1884 ntBASIC27■■□□□ 1.91
RETREG2Q8NC44 AC142472.1-201ENST00000612013 1741 ntBASIC26.99■■□□□ 1.91
RETREG2Q8NC44 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RETREG2Q8NC44 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.99■■□□□ 1.91
RETREG2Q8NC44 AL356441.2-201ENST00000443009 864 ntBASIC26.98■■□□□ 1.91
RETREG2Q8NC44 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.98■■□□□ 1.91
RETREG2Q8NC44 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.98■■□□□ 1.91
RETREG2Q8NC44 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
RETREG2Q8NC44 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RETREG2Q8NC44 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RETREG2Q8NC44 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RETREG2Q8NC44 AC087393.1-201ENST00000582896 145 ntBASIC26.97■■□□□ 1.91
RETREG2Q8NC44 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
RETREG2Q8NC44 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
RETREG2Q8NC44 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RETREG2Q8NC44 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
RETREG2Q8NC44 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
RETREG2Q8NC44 DUSP8P4-201ENST00000399538 1761 ntBASIC26.95■■□□□ 1.9
RETREG2Q8NC44 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.95■■□□□ 1.9
RETREG2Q8NC44 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
RETREG2Q8NC44 AC239859.2-201ENST00000444165 318 ntBASIC26.95■■□□□ 1.9
RETREG2Q8NC44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RETREG2Q8NC44 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RETREG2Q8NC44 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RETREG2Q8NC44 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 AC092803.2-201ENST00000564287 1899 ntBASIC26.94■■□□□ 1.9
RETREG2Q8NC44 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.94■■□□□ 1.9
RETREG2Q8NC44 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.93■■□□□ 1.9
RETREG2Q8NC44 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.93■■□□□ 1.9
RETREG2Q8NC44 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
RETREG2Q8NC44 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RETREG2Q8NC44 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RETREG2Q8NC44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.92■■□□□ 1.9
RETREG2Q8NC44 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 RPS2P7-201ENST00000447334 885 ntBASIC26.91■■□□□ 1.9
RETREG2Q8NC44 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.91■■□□□ 1.9
RETREG2Q8NC44 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms