Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Abca8bQ8K440 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC33.1■■■□□ 2.89
Abca8bQ8K440 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
Abca8bQ8K440 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC33.1■■■□□ 2.89
Abca8bQ8K440 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Abca8bQ8K440 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC33.09■■■□□ 2.89
Abca8bQ8K440 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Abca8bQ8K440 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Abca8bQ8K440 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Abca8bQ8K440 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
Abca8bQ8K440 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Abca8bQ8K440 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
Abca8bQ8K440 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Abca8bQ8K440 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Abca8bQ8K440 AC122428.3-201ENSMUST00000215551 2290 ntBASIC33.06■■■□□ 2.88
Abca8bQ8K440 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC33.06■■■□□ 2.88
Abca8bQ8K440 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Abca8bQ8K440 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Abca8bQ8K440 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Abca8bQ8K440 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Abca8bQ8K440 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC33.05■■■□□ 2.88
Abca8bQ8K440 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC33.05■■■□□ 2.88
Abca8bQ8K440 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Abca8bQ8K440 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC33.04■■■□□ 2.88
Abca8bQ8K440 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC33.04■■■□□ 2.88
Abca8bQ8K440 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Abca8bQ8K440 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Abca8bQ8K440 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC33.02■■■□□ 2.88
Abca8bQ8K440 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
Abca8bQ8K440 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC33.02■■■□□ 2.88
Abca8bQ8K440 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Abca8bQ8K440 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Abca8bQ8K440 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC33.02■■■□□ 2.88
Abca8bQ8K440 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.88
Abca8bQ8K440 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Abca8bQ8K440 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Abca8bQ8K440 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC33.01■■■□□ 2.87
Abca8bQ8K440 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Abca8bQ8K440 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Abca8bQ8K440 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC33■■■□□ 2.87
Abca8bQ8K440 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Abca8bQ8K440 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC32.99■■■□□ 2.87
Abca8bQ8K440 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Abca8bQ8K440 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Abca8bQ8K440 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Abca8bQ8K440 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Abca8bQ8K440 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Abca8bQ8K440 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Abca8bQ8K440 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Abca8bQ8K440 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
Abca8bQ8K440 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Abca8bQ8K440 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Abca8bQ8K440 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Abca8bQ8K440 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Abca8bQ8K440 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Abca8bQ8K440 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC32.95■■■□□ 2.86
Abca8bQ8K440 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
Abca8bQ8K440 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Abca8bQ8K440 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Abca8bQ8K440 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Abca8bQ8K440 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Abca8bQ8K440 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Abca8bQ8K440 Gm18284-201ENSMUST00000172604 624 ntBASIC32.92■■■□□ 2.86
Abca8bQ8K440 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC32.92■■■□□ 2.86
Abca8bQ8K440 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Abca8bQ8K440 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Abca8bQ8K440 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Abca8bQ8K440 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Abca8bQ8K440 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Abca8bQ8K440 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Abca8bQ8K440 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Abca8bQ8K440 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Abca8bQ8K440 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
Abca8bQ8K440 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Abca8bQ8K440 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Abca8bQ8K440 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
Abca8bQ8K440 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
Abca8bQ8K440 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC32.87■■■□□ 2.85
Abca8bQ8K440 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Abca8bQ8K440 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
Abca8bQ8K440 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Abca8bQ8K440 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Abca8bQ8K440 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
Abca8bQ8K440 Gm8495-201ENSMUST00000188740 694 ntBASIC32.86■■■□□ 2.85
Abca8bQ8K440 Gm2011-201ENSMUST00000203124 1263 ntBASIC32.86■■■□□ 2.85
Abca8bQ8K440 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Abca8bQ8K440 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
Abca8bQ8K440 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
Abca8bQ8K440 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Abca8bQ8K440 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Abca8bQ8K440 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC32.84■■■□□ 2.85
Abca8bQ8K440 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Abca8bQ8K440 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms