Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RFX6Q8HWS3 AC142381.3-201ENST00000568208 1670 ntBASIC24.78■■□□□ 1.56
RFX6Q8HWS3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.78■■□□□ 1.56
RFX6Q8HWS3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RFX6Q8HWS3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
RFX6Q8HWS3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RFX6Q8HWS3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 AC007029.1-201ENST00000604183 313 ntBASIC24.76■■□□□ 1.55
RFX6Q8HWS3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
RFX6Q8HWS3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
RFX6Q8HWS3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RFX6Q8HWS3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
RFX6Q8HWS3 AC138932.3-201ENST00000567634 1902 ntBASIC24.73■■□□□ 1.55
RFX6Q8HWS3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RFX6Q8HWS3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.71■■□□□ 1.55
RFX6Q8HWS3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
RFX6Q8HWS3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RFX6Q8HWS3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RFX6Q8HWS3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
RFX6Q8HWS3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.7■■□□□ 1.54
RFX6Q8HWS3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFX6Q8HWS3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFX6Q8HWS3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RFX6Q8HWS3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.69■■□□□ 1.54
RFX6Q8HWS3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.69■■□□□ 1.54
RFX6Q8HWS3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFX6Q8HWS3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RFX6Q8HWS3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFX6Q8HWS3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
RFX6Q8HWS3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RFX6Q8HWS3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RFX6Q8HWS3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.66■■□□□ 1.54
RFX6Q8HWS3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.65■■□□□ 1.54
RFX6Q8HWS3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.65■■□□□ 1.54
RFX6Q8HWS3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
RFX6Q8HWS3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RFX6Q8HWS3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RFX6Q8HWS3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
RFX6Q8HWS3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RFX6Q8HWS3 AC026202.3-201ENST00000600805 1127 ntBASIC24.64■■□□□ 1.54
RFX6Q8HWS3 RAP2CP1-202ENST00000605179 643 ntBASIC24.64■■□□□ 1.54
RFX6Q8HWS3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RFX6Q8HWS3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RFX6Q8HWS3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RFX6Q8HWS3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms