Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
Pabpc5Q8C7D3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms