Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm11541Q8C4D8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gm11541Q8C4D8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm11541Q8C4D8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm11541Q8C4D8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Gm11541Q8C4D8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm11541Q8C4D8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11541Q8C4D8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11541Q8C4D8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11541Q8C4D8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11541Q8C4D8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm11541Q8C4D8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Gm11541Q8C4D8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Gm11541Q8C4D8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm11541Q8C4D8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm11541Q8C4D8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm11541Q8C4D8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm11541Q8C4D8 Notumos-201ENSMUST00000151998 2659 ntBASIC19.29■□□□□ 0.68
Gm11541Q8C4D8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm11541Q8C4D8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.29■□□□□ 0.68
Gm11541Q8C4D8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11541Q8C4D8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm11541Q8C4D8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm11541Q8C4D8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm11541Q8C4D8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11541Q8C4D8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11541Q8C4D8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm11541Q8C4D8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Gm11541Q8C4D8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm11541Q8C4D8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm11541Q8C4D8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.24■□□□□ 0.67
Gm11541Q8C4D8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11541Q8C4D8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm11541Q8C4D8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm11541Q8C4D8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms