Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf3Q8C120 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Cap2-205ENSMUST00000225824 1634 ntBASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf3Q8C120 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf3Q8C120 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Gm22567-201ENSMUST00000175542 342 ntBASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf3Q8C120 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf3Q8C120 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf3Q8C120 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Sh3rf3Q8C120 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sh3rf3Q8C120 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3rf3Q8C120 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.43■■□□□ 1.18
Sh3rf3Q8C120 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf3Q8C120 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf3Q8C120 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf3Q8C120 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Sh3rf3Q8C120 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Sh3rf3Q8C120 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Sh3rf3Q8C120 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Gm10420-201ENSMUST00000121713 882 ntBASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms