Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.99■■■□□ 2.55
Usp47Q8BY87 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Usp47Q8BY87 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Usp47Q8BY87 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Usp47Q8BY87 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Usp47Q8BY87 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp47Q8BY87 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Usp47Q8BY87 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
Usp47Q8BY87 Gm15820-201ENSMUST00000201566 728 ntBASIC30.98■■■□□ 2.55
Usp47Q8BY87 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp47Q8BY87 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp47Q8BY87 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Usp47Q8BY87 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp47Q8BY87 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC30.96■■■□□ 2.55
Usp47Q8BY87 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Usp47Q8BY87 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp47Q8BY87 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp47Q8BY87 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Usp47Q8BY87 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC30.95■■■□□ 2.55
Usp47Q8BY87 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Usp47Q8BY87 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Usp47Q8BY87 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC30.95■■■□□ 2.54
Usp47Q8BY87 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Usp47Q8BY87 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC30.92■■■□□ 2.54
Usp47Q8BY87 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Usp47Q8BY87 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Usp47Q8BY87 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Usp47Q8BY87 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
Usp47Q8BY87 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Usp47Q8BY87 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Usp47Q8BY87 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Usp47Q8BY87 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Usp47Q8BY87 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Usp47Q8BY87 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Usp47Q8BY87 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC30.89■■■□□ 2.54
Usp47Q8BY87 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Usp47Q8BY87 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Usp47Q8BY87 Gm16464-201ENSMUST00000117815 1095 ntBASIC30.88■■■□□ 2.53
Usp47Q8BY87 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Usp47Q8BY87 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Usp47Q8BY87 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Usp47Q8BY87 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC30.87■■■□□ 2.53
Usp47Q8BY87 Gm10232-201ENSMUST00000089221 720 ntBASIC30.87■■■□□ 2.53
Usp47Q8BY87 Gm28536-201ENSMUST00000190971 1317 ntBASIC30.86■■■□□ 2.53
Usp47Q8BY87 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC30.86■■■□□ 2.53
Usp47Q8BY87 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp47Q8BY87 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Usp47Q8BY87 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Usp47Q8BY87 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Usp47Q8BY87 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp47Q8BY87 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Usp47Q8BY87 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Gm18755-201ENSMUST00000218030 1099 ntBASIC30.82■■■□□ 2.52
Usp47Q8BY87 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Usp47Q8BY87 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Usp47Q8BY87 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Usp47Q8BY87 AC093043.1-201ENSMUST00000226700 898 ntBASIC30.81■■■□□ 2.52
Usp47Q8BY87 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Usp47Q8BY87 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Usp47Q8BY87 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Usp47Q8BY87 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Usp47Q8BY87 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
Usp47Q8BY87 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Usp47Q8BY87 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp47Q8BY87 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms