Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
Trnp1Q80ZI1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Trnp1Q80ZI1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Trnp1Q80ZI1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Trnp1Q80ZI1 Golgb1-201ENSMUST00000023534 498 ntBASIC24.98■■□□□ 1.59
Trnp1Q80ZI1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Trnp1Q80ZI1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Trnp1Q80ZI1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Trnp1Q80ZI1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Trnp1Q80ZI1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Trnp1Q80ZI1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Trnp1Q80ZI1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.94■■□□□ 1.58
Trnp1Q80ZI1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.93■■□□□ 1.58
Trnp1Q80ZI1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.93■■□□□ 1.58
Trnp1Q80ZI1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Trnp1Q80ZI1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trnp1Q80ZI1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trnp1Q80ZI1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trnp1Q80ZI1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Trnp1Q80ZI1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trnp1Q80ZI1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.9■■□□□ 1.58
Trnp1Q80ZI1 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.9■■□□□ 1.58
Trnp1Q80ZI1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Trnp1Q80ZI1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.89■■□□□ 1.58
Trnp1Q80ZI1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.88■■□□□ 1.57
Trnp1Q80ZI1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trnp1Q80ZI1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Trnp1Q80ZI1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Trnp1Q80ZI1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trnp1Q80ZI1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trnp1Q80ZI1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trnp1Q80ZI1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trnp1Q80ZI1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Trnp1Q80ZI1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Trnp1Q80ZI1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trnp1Q80ZI1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Trnp1Q80ZI1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trnp1Q80ZI1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Trnp1Q80ZI1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.83■■□□□ 1.56
Trnp1Q80ZI1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trnp1Q80ZI1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.82■■□□□ 1.56
Trnp1Q80ZI1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Trnp1Q80ZI1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trnp1Q80ZI1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trnp1Q80ZI1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trnp1Q80ZI1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trnp1Q80ZI1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 Gm8495-201ENSMUST00000188740 694 ntBASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trnp1Q80ZI1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trnp1Q80ZI1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms