Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Gm29257-201ENSMUST00000186115 639 ntBASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Ttc28Q80XJ3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Ttc28Q80XJ3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ttc28Q80XJ3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ttc28Q80XJ3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ttc28Q80XJ3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ttc28Q80XJ3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ttc28Q80XJ3 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.5■□□□□ 0.55
Ttc28Q80XJ3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.49■□□□□ 0.55
Ttc28Q80XJ3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.48■□□□□ 0.55
Ttc28Q80XJ3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ttc28Q80XJ3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc28Q80XJ3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ttc28Q80XJ3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ttc28Q80XJ3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc28Q80XJ3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc28Q80XJ3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc28Q80XJ3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ttc28Q80XJ3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ttc28Q80XJ3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ttc28Q80XJ3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ttc28Q80XJ3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.43■□□□□ 0.54
Ttc28Q80XJ3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc28Q80XJ3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ttc28Q80XJ3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.42■□□□□ 0.54
Ttc28Q80XJ3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ttc28Q80XJ3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.4■□□□□ 0.54
Ttc28Q80XJ3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ttc28Q80XJ3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ttc28Q80XJ3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.39■□□□□ 0.53
Ttc28Q80XJ3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc28Q80XJ3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms