Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx6Q6P8X1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snx6Q6P8X1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx6Q6P8X1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx6Q6P8X1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Gm27502-201ENSMUST00000183495 199 ntBASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Snx6Q6P8X1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx6Q6P8X1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snx6Q6P8X1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Snx6Q6P8X1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 Gm14523-201ENSMUST00000117260 558 ntBASIC20.51■□□□□ 0.87
Snx6Q6P8X1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx6Q6P8X1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.5■□□□□ 0.87
Snx6Q6P8X1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx6Q6P8X1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx6Q6P8X1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx6Q6P8X1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx6Q6P8X1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx6Q6P8X1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Snx6Q6P8X1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx6Q6P8X1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Gm7332-201ENSMUST00000118351 454 ntBASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx6Q6P8X1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snx6Q6P8X1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Snx6Q6P8X1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx6Q6P8X1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snx6Q6P8X1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx6Q6P8X1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms