Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp200Q6P4T2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp200Q6P4T2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snrnp200Q6P4T2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Snrnp200Q6P4T2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Snrnp200Q6P4T2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp200Q6P4T2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Snrnp200Q6P4T2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp200Q6P4T2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp200Q6P4T2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp200Q6P4T2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snrnp200Q6P4T2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp200Q6P4T2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snrnp200Q6P4T2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.63■□□□□ 0.89
Snrnp200Q6P4T2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Snrnp200Q6P4T2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.63■□□□□ 0.89
Snrnp200Q6P4T2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Snrnp200Q6P4T2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp200Q6P4T2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snrnp200Q6P4T2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.62■□□□□ 0.89
Snrnp200Q6P4T2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Snrnp200Q6P4T2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp200Q6P4T2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.6■□□□□ 0.89
Snrnp200Q6P4T2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp200Q6P4T2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Snrnp200Q6P4T2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Snrnp200Q6P4T2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Snrnp200Q6P4T2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Snrnp200Q6P4T2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.58■□□□□ 0.89
Snrnp200Q6P4T2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp200Q6P4T2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Snrnp200Q6P4T2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp200Q6P4T2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.57■□□□□ 0.88
Snrnp200Q6P4T2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp200Q6P4T2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Snrnp200Q6P4T2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Snrnp200Q6P4T2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp200Q6P4T2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp200Q6P4T2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp200Q6P4T2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Snrnp200Q6P4T2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.56■□□□□ 0.88
Snrnp200Q6P4T2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp200Q6P4T2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.55■□□□□ 0.88
Snrnp200Q6P4T2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snrnp200Q6P4T2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
Snrnp200Q6P4T2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.54■□□□□ 0.88
Snrnp200Q6P4T2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snrnp200Q6P4T2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snrnp200Q6P4T2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Snrnp200Q6P4T2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Snrnp200Q6P4T2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.51■□□□□ 0.87
Snrnp200Q6P4T2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snrnp200Q6P4T2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.48■□□□□ 0.87
Snrnp200Q6P4T2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp200Q6P4T2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snrnp200Q6P4T2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms