Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VclQ64727 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.19■□□□□ 0.98
VclQ64727 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.19■□□□□ 0.98
VclQ64727 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VclQ64727 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
VclQ64727 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VclQ64727 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
VclQ64727 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
VclQ64727 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VclQ64727 Gm22567-201ENSMUST00000175542 342 ntBASIC21.17■□□□□ 0.98
VclQ64727 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VclQ64727 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VclQ64727 Gm43566-201ENSMUST00000196851 808 ntBASIC21.16■□□□□ 0.98
VclQ64727 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VclQ64727 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VclQ64727 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VclQ64727 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VclQ64727 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VclQ64727 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.15■□□□□ 0.98
VclQ64727 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VclQ64727 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VclQ64727 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VclQ64727 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VclQ64727 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.14■□□□□ 0.97
VclQ64727 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VclQ64727 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
VclQ64727 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.13■□□□□ 0.97
VclQ64727 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.13■□□□□ 0.97
VclQ64727 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VclQ64727 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
VclQ64727 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.12■□□□□ 0.97
VclQ64727 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VclQ64727 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
VclQ64727 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VclQ64727 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VclQ64727 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VclQ64727 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VclQ64727 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VclQ64727 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VclQ64727 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VclQ64727 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
VclQ64727 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.08■□□□□ 0.97
VclQ64727 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
VclQ64727 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VclQ64727 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
VclQ64727 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
VclQ64727 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
VclQ64727 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VclQ64727 Gm5812-201ENSMUST00000061073 957 ntBASIC21.07■□□□□ 0.96
VclQ64727 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VclQ64727 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VclQ64727 Gm13238-201ENSMUST00000117655 780 ntBASIC21.06■□□□□ 0.96
VclQ64727 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
VclQ64727 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VclQ64727 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms