Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Clcn1Q64347 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC27.58■■■□□ 2.01
Clcn1Q64347 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Clcn1Q64347 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
Clcn1Q64347 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Clcn1Q64347 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2
Clcn1Q64347 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Clcn1Q64347 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Clcn1Q64347 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.57■■■□□ 2
Clcn1Q64347 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Clcn1Q64347 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Clcn1Q64347 Gm21956-201ENSMUST00000179946 522 ntBASIC27.56■■■□□ 2
Clcn1Q64347 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Clcn1Q64347 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Clcn1Q64347 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
Clcn1Q64347 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.55■■■□□ 2
Clcn1Q64347 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Clcn1Q64347 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Clcn1Q64347 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Clcn1Q64347 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.54■■■□□ 2
Clcn1Q64347 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC27.54■■■□□ 2
Clcn1Q64347 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC27.54■■■□□ 2
Clcn1Q64347 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.54■■■□□ 2
Clcn1Q64347 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.54■■■□□ 2
Clcn1Q64347 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Clcn1Q64347 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Clcn1Q64347 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC27.53■■■□□ 2
Clcn1Q64347 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.53■■■□□ 2
Clcn1Q64347 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.53■■■□□ 2
Clcn1Q64347 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Clcn1Q64347 AC117245.4-201ENSMUST00000217388 1646 ntBASIC27.52■■■□□ 2
Clcn1Q64347 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Clcn1Q64347 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Clcn1Q64347 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC27.52■■■□□ 2
Clcn1Q64347 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC27.52■■■□□ 2
Clcn1Q64347 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Clcn1Q64347 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Clcn1Q64347 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Clcn1Q64347 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC27.51■■□□□ 1.99
Clcn1Q64347 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Clcn1Q64347 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Clcn1Q64347 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Clcn1Q64347 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC27.5■■□□□ 1.99
Clcn1Q64347 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Clcn1Q64347 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Clcn1Q64347 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Clcn1Q64347 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC27.5■■□□□ 1.99
Clcn1Q64347 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Clcn1Q64347 Gm22238-201ENSMUST00000175222 88 ntBASIC27.49■■□□□ 1.99
Clcn1Q64347 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Clcn1Q64347 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC27.48■■□□□ 1.99
Clcn1Q64347 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Clcn1Q64347 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Clcn1Q64347 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC27.47■■□□□ 1.99
Clcn1Q64347 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC27.47■■□□□ 1.99
Clcn1Q64347 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Clcn1Q64347 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Clcn1Q64347 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Clcn1Q64347 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Nsd1-206ENSMUST00000224918 1001 ntBASIC27.46■■□□□ 1.99
Clcn1Q64347 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.46■■□□□ 1.99
Clcn1Q64347 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Clcn1Q64347 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC27.45■■□□□ 1.98
Clcn1Q64347 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC27.45■■□□□ 1.98
Clcn1Q64347 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Clcn1Q64347 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Clcn1Q64347 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Clcn1Q64347 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Clcn1Q64347 Gm17641-201ENSMUST00000166328 2350 ntBASIC27.44■■□□□ 1.98
Clcn1Q64347 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.44■■□□□ 1.98
Clcn1Q64347 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.44■■□□□ 1.98
Clcn1Q64347 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Clcn1Q64347 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Clcn1Q64347 Gm40881-201ENSMUST00000223397 166 ntBASIC27.43■■□□□ 1.98
Clcn1Q64347 Gm13241-201ENSMUST00000094493 780 ntBASIC27.43■■□□□ 1.98
Clcn1Q64347 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Clcn1Q64347 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Clcn1Q64347 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Clcn1Q64347 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Clcn1Q64347 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Clcn1Q64347 Gm9847-201ENSMUST00000052528 599 ntBASIC27.42■■□□□ 1.98
Clcn1Q64347 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Clcn1Q64347 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Clcn1Q64347 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Clcn1Q64347 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Clcn1Q64347 Gm20634-201ENSMUST00000090779 2956 ntBASIC27.41■■□□□ 1.98
Clcn1Q64347 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC27.4■■□□□ 1.98
Clcn1Q64347 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Clcn1Q64347 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Clcn1Q64347 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Clcn1Q64347 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC27.39■■□□□ 1.98
Clcn1Q64347 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Clcn1Q64347 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Clcn1Q64347 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Clcn1Q64347 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Clcn1Q64347 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms