Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sptbn1Q62261 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sptbn1Q62261 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.53■□□□□ 0.56
Sptbn1Q62261 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sptbn1Q62261 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sptbn1Q62261 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.53■□□□□ 0.56
Sptbn1Q62261 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sptbn1Q62261 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sptbn1Q62261 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sptbn1Q62261 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sptbn1Q62261 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sptbn1Q62261 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sptbn1Q62261 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sptbn1Q62261 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.51■□□□□ 0.55
Sptbn1Q62261 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.51■□□□□ 0.55
Sptbn1Q62261 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sptbn1Q62261 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sptbn1Q62261 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.51■□□□□ 0.55
Sptbn1Q62261 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sptbn1Q62261 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sptbn1Q62261 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sptbn1Q62261 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sptbn1Q62261 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.49■□□□□ 0.55
Sptbn1Q62261 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sptbn1Q62261 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sptbn1Q62261 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sptbn1Q62261 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sptbn1Q62261 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.48■□□□□ 0.55
Sptbn1Q62261 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.48■□□□□ 0.55
Sptbn1Q62261 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sptbn1Q62261 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sptbn1Q62261 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sptbn1Q62261 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sptbn1Q62261 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sptbn1Q62261 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.47■□□□□ 0.55
Sptbn1Q62261 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sptbn1Q62261 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sptbn1Q62261 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sptbn1Q62261 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.46■□□□□ 0.55
Sptbn1Q62261 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sptbn1Q62261 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sptbn1Q62261 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sptbn1Q62261 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sptbn1Q62261 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.45■□□□□ 0.54
Sptbn1Q62261 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Gm5874-201ENSMUST00000096101 508 ntBASIC18.45■□□□□ 0.54
Sptbn1Q62261 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.45■□□□□ 0.54
Sptbn1Q62261 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sptbn1Q62261 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sptbn1Q62261 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Sptbn1Q62261 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sptbn1Q62261 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sptbn1Q62261 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Gm6139-201ENSMUST00000079261 882 ntBASIC18.43■□□□□ 0.54
Sptbn1Q62261 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptbn1Q62261 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptbn1Q62261 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.41■□□□□ 0.54
Sptbn1Q62261 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptbn1Q62261 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sptbn1Q62261 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptbn1Q62261 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptbn1Q62261 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms