Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7d-3Q5R1I1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Gm44428-201ENSMUST00000204474 874 ntBASIC15.77■□□□□ 0.12
Trav7d-3Q5R1I1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-3Q5R1I1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-3Q5R1I1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7d-3Q5R1I1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav7d-3Q5R1I1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav7d-3Q5R1I1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav7d-3Q5R1I1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav7d-3Q5R1I1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-3Q5R1I1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav7d-3Q5R1I1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-3Q5R1I1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-3Q5R1I1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-3Q5R1I1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-3Q5R1I1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-3Q5R1I1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-3Q5R1I1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-3Q5R1I1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-3Q5R1I1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-3Q5R1I1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Gm9806-201ENSMUST00000051080 552 ntBASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-3Q5R1I1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms