Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Rnf223Q3UV31 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf223Q3UV31 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf223Q3UV31 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf223Q3UV31 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rnf223Q3UV31 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.12■□□□□ 0.97
Rnf223Q3UV31 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Gm22567-201ENSMUST00000175542 342 ntBASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf223Q3UV31 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf223Q3UV31 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf223Q3UV31 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rnf223Q3UV31 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf223Q3UV31 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf223Q3UV31 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf223Q3UV31 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf223Q3UV31 Rps24-207ENSMUST00000224568 714 ntBASIC21.07■□□□□ 0.96
Rnf223Q3UV31 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf223Q3UV31 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf223Q3UV31 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.06■□□□□ 0.96
Rnf223Q3UV31 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf223Q3UV31 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Rnf223Q3UV31 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Rnf223Q3UV31 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rnf223Q3UV31 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.05■□□□□ 0.96
Rnf223Q3UV31 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.05■□□□□ 0.96
Rnf223Q3UV31 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf223Q3UV31 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Gm45102-201ENSMUST00000207427 857 ntBASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Gm9959-201ENSMUST00000068277 390 ntBASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf223Q3UV31 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf223Q3UV31 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rnf223Q3UV31 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.02■□□□□ 0.96
Rnf223Q3UV31 Gm14117-201ENSMUST00000122417 843 ntBASIC21.02■□□□□ 0.96
Rnf223Q3UV31 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf223Q3UV31 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf223Q3UV31 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf223Q3UV31 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf223Q3UV31 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.01■□□□□ 0.95
Rnf223Q3UV31 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf223Q3UV31 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf223Q3UV31 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf223Q3UV31 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf223Q3UV31 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf223Q3UV31 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21■□□□□ 0.95
Rnf223Q3UV31 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21■□□□□ 0.95
Rnf223Q3UV31 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf223Q3UV31 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms