Protein–RNA interactions for Protein: Q3USQ7

Syndig1l, Synapse differentiation-inducing gene protein 1-like, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syndig1lQ3USQ7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Syndig1lQ3USQ7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Syndig1lQ3USQ7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Syndig1lQ3USQ7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Syndig1lQ3USQ7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Syndig1lQ3USQ7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Syndig1lQ3USQ7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Syndig1lQ3USQ7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syndig1lQ3USQ7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syndig1lQ3USQ7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.34■□□□□ 0.85
Syndig1lQ3USQ7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Syndig1lQ3USQ7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Syndig1lQ3USQ7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.33■□□□□ 0.85
Syndig1lQ3USQ7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Syndig1lQ3USQ7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Syndig1lQ3USQ7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Syndig1lQ3USQ7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Syndig1lQ3USQ7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Syndig1lQ3USQ7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Syndig1lQ3USQ7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Syndig1lQ3USQ7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Syndig1lQ3USQ7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Syndig1lQ3USQ7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syndig1lQ3USQ7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Syndig1lQ3USQ7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Syndig1lQ3USQ7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Syndig1lQ3USQ7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Syndig1lQ3USQ7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.27■□□□□ 0.84
Syndig1lQ3USQ7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syndig1lQ3USQ7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syndig1lQ3USQ7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Syndig1lQ3USQ7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.27■□□□□ 0.83
Syndig1lQ3USQ7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Syndig1lQ3USQ7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Syndig1lQ3USQ7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syndig1lQ3USQ7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syndig1lQ3USQ7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.25■□□□□ 0.83
Syndig1lQ3USQ7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syndig1lQ3USQ7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.24■□□□□ 0.83
Syndig1lQ3USQ7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Syndig1lQ3USQ7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Syndig1lQ3USQ7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syndig1lQ3USQ7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syndig1lQ3USQ7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.23■□□□□ 0.83
Syndig1lQ3USQ7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syndig1lQ3USQ7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.22■□□□□ 0.83
Syndig1lQ3USQ7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syndig1lQ3USQ7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syndig1lQ3USQ7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syndig1lQ3USQ7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syndig1lQ3USQ7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.19■□□□□ 0.82
Syndig1lQ3USQ7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms