Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.12■■□□□ 1.13
Fam196aQ3USH1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Fam196aQ3USH1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Fam196aQ3USH1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Fam196aQ3USH1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.11■■□□□ 1.13
Fam196aQ3USH1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.11■■□□□ 1.13
Fam196aQ3USH1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Fam196aQ3USH1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Fam196aQ3USH1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.11■■□□□ 1.13
Fam196aQ3USH1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Fam196aQ3USH1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.1■■□□□ 1.13
Fam196aQ3USH1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Fam196aQ3USH1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Fam196aQ3USH1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Fam196aQ3USH1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Fam196aQ3USH1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.08■■□□□ 1.13
Fam196aQ3USH1 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.08■■□□□ 1.13
Fam196aQ3USH1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.08■■□□□ 1.13
Fam196aQ3USH1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Fam196aQ3USH1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Fam196aQ3USH1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Fam196aQ3USH1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Fam196aQ3USH1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Fam196aQ3USH1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Fam196aQ3USH1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Fam196aQ3USH1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.05■■□□□ 1.12
Fam196aQ3USH1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Fam196aQ3USH1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Fam196aQ3USH1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Fam196aQ3USH1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Fam196aQ3USH1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Fam196aQ3USH1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.04■■□□□ 1.12
Fam196aQ3USH1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.04■■□□□ 1.12
Fam196aQ3USH1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Fam196aQ3USH1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Fam196aQ3USH1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Fam196aQ3USH1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Fam196aQ3USH1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.03■■□□□ 1.12
Fam196aQ3USH1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.03■■□□□ 1.12
Fam196aQ3USH1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.02■■□□□ 1.12
Fam196aQ3USH1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Fam196aQ3USH1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Fam196aQ3USH1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Fam196aQ3USH1 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.01■■□□□ 1.11
Fam196aQ3USH1 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.01■■□□□ 1.11
Fam196aQ3USH1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Fam196aQ3USH1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Fam196aQ3USH1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22■■□□□ 1.11
Fam196aQ3USH1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Fam196aQ3USH1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22■■□□□ 1.11
Fam196aQ3USH1 Gm8093-201ENSMUST00000128935 1892 ntBASIC22■■□□□ 1.11
Fam196aQ3USH1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Fam196aQ3USH1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Fam196aQ3USH1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Fam196aQ3USH1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.99■■□□□ 1.11
Fam196aQ3USH1 Gm6139-201ENSMUST00000079261 882 ntBASIC21.99■■□□□ 1.11
Fam196aQ3USH1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Fam196aQ3USH1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Fam196aQ3USH1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Fam196aQ3USH1 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.96■■□□□ 1.11
Fam196aQ3USH1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.96■■□□□ 1.11
Fam196aQ3USH1 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.96■■□□□ 1.11
Fam196aQ3USH1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms